RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 CTRB2Q6GPI1 263 aa12.73□□□□□ -0.37
EDC3-216ENST00000569561 IL34Q6ZMJ4 242 aa12.73□□□□□ -0.37
EDC3-216ENST00000569561 SLC25A42Q86VD7 318 aa12.73□□□□□ -0.37
EDC3-216ENST00000569561 FCAMRQ8WWV6 532 aa12.73□□□□□ -0.37
EDC3-216ENST00000569561 DGCR14Q96DF8 476 aaKnown RBP12.73□□□□□ -0.37
EDC3-216ENST00000569561 PEF1Q9UBV8 284 aaKnown RBP12.73□□□□□ -0.37
EDC3-216ENST00000569561 ZNF256Q9Y2P7 627 aaPredicted RBP12.73□□□□□ -0.37
EDC3-216ENST00000569561 IGLC7A0M8Q6 106 aa12.72□□□□□ -0.37
EDC3-216ENST00000569561 SAP30O75446 220 aa12.72□□□□□ -0.37
EDC3-216ENST00000569561 CD74P04233 296 aa12.72□□□□□ -0.37
EDC3-216ENST00000569561 PSMB6P28072 239 aa12.72□□□□□ -0.37
EDC3-216ENST00000569561 RNASE12Q5GAN4 147 aaKnown RBP12.72□□□□□ -0.37
EDC3-216ENST00000569561 CMTM1Q8IZ96 169 aa12.72□□□□□ -0.37
EDC3-216ENST00000569561 NECAP1Q8NC96 275 aa12.72□□□□□ -0.37
EDC3-216ENST00000569561 FYTTD1Q96QD9 318 aaKnown RBP12.72□□□□□ -0.37
EDC3-216ENST00000569561 SLIRPQ9GZT3 109 aaKnown RBP12.72□□□□□ -0.37
EDC3-216ENST00000569561 FAM212BQ9NTI7 297 aaPredicted RBP12.72□□□□□ -0.37
EDC3-216ENST00000569561 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.71□□□□□ -0.37
EDC3-216ENST00000569561 MARCH11A6NNE9 402 aa12.71□□□□□ -0.37
EDC3-216ENST00000569561 H3BMQ9 156 aa12.71□□□□□ -0.37
EDC3-216ENST00000569561 BMPR1BO00238 502 aa12.71□□□□□ -0.37
EDC3-216ENST00000569561 OR2J3O76001 311 aa12.71□□□□□ -0.37
EDC3-216ENST00000569561 CD3DP04234 171 aa12.71□□□□□ -0.37
EDC3-216ENST00000569561 TBPP20226 339 aa12.71□□□□□ -0.37
EDC3-216ENST00000569561 PTBP1P26599 531 aaKnown RBP eCLIP12.71□□□□□ -0.37
EDC3-216ENST00000569561 EXOSC2Q13868 293 aaKnown RBP12.71□□□□□ -0.37
EDC3-216ENST00000569561 PHLDA2Q53GA4 152 aa12.71□□□□□ -0.37
EDC3-216ENST00000569561 LPCAT3Q6P1A2 487 aa12.71□□□□□ -0.37
EDC3-216ENST00000569561 B9D2Q9BPU9 175 aa12.71□□□□□ -0.37
EDC3-216ENST00000569561 HRASLSQ9HDD0 168 aa12.71□□□□□ -0.37
EDC3-216ENST00000569561 IGKV1-39P01597 117 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 IGKV1D-39P04432 117 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 LPAR6P43657 344 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 RND3P61587 244 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 TSPAN5P62079 268 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 ATP5G2Q06055 141 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 C15orf32Q32M92 178 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 DEFB121Q5J5C9 76 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 SLC38A6Q8IZM9 456 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 ARRDC1Q8N5I2 433 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 OR4D10Q8NGI6 311 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 C15orf40Q8WUR7 153 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 ISOC1Q96CN7 298 aa12.7□□□□□ -0.38
EDC3-216ENST00000569561 SRSF8Q9BRL6 282 aaKnown RBP12.7□□□□□ -0.38
EDC3-216ENST00000569561 HUWE1Q7Z6Z7 4374 aaKnown RBP12.69□□□□□ -0.38
EDC3-216ENST00000569561 IGLV11-55A0A075B6I3 123 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 GABARAPH6UMI1 98 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 NDUFB8O95169 186 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 IGLV1-51P01701 117 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 RPA2P15927 270 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 SPNP16150 400 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 DCTN2Q13561 401 aaKnown RBP12.69□□□□□ -0.38
EDC3-216ENST00000569561 RNASE10Q5GAN6 216 aaKnown RBP12.69□□□□□ -0.38
EDC3-216ENST00000569561 TBC1D26Q86UD7 250 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 TMEM229BQ8NBD8 167 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 DMBX1Q8NFW5 382 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 OR9G4Q8NGQ1 327 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 SMIM4Q8WVI0 70 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 MRGPRFQ96AM1 343 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 CCDC140Q96MF4 163 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 CEPT1Q9Y6K0 416 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 COL7A1Q02388 2944 aa12.69□□□□□ -0.38
EDC3-216ENST00000569561 CTDSPLO15194 276 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 RGS5O15539 181 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 REG1AP05451 166 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 G6PCP35575 357 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 SYNJ2BPP57105 145 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 MRPS10P82664 201 aaKnown RBP12.68□□□□□ -0.38
EDC3-216ENST00000569561 SSBP1Q04837 148 aaKnown RBP12.68□□□□□ -0.38
EDC3-216ENST00000569561 THOC7Q6I9Y2 204 aaKnown RBP12.68□□□□□ -0.38
EDC3-216ENST00000569561 HAPLN4Q86UW8 402 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 OR6Q1Q8NGQ2 317 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 SEC22AQ96IW7 307 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 SOSTQ9BQB4 213 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 QTRT1Q9BXR0 403 aaKnown RBP12.68□□□□□ -0.38
EDC3-216ENST00000569561 NXF2Q9GZY0 626 aaKnown RBP12.68□□□□□ -0.38
EDC3-216ENST00000569561 NDUFA4L2Q9NRX3 87 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 SIGLEC8Q9NYZ4 499 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 FBXL7Q9UJT9 491 aa12.68□□□□□ -0.38
EDC3-216ENST00000569561 TEX50A0A1B0GTY4 177 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 DBX1A6NMT0 343 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 KRASP01116 189 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 CSN3P07498 182 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 ERVK-16P61578 105 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 WT1-ASQ06250 92 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 OR10W1Q8NGF6 305 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 ZNF486Q96H40 463 aaPredicted RBP12.67□□□□□ -0.38
EDC3-216ENST00000569561 OR4C12Q96R67 309 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 ELOVL1Q9BW60 279 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 COMMD5Q9GZQ3 224 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 RBM38Q9H0Z9 239 aaKnown RBP12.67□□□□□ -0.38
EDC3-216ENST00000569561 SORL1Q92673 2214 aa12.67□□□□□ -0.38
EDC3-216ENST00000569561 DPPA5A6NC42 116 aa12.66□□□□□ -0.38
EDC3-216ENST00000569561 GP9P14770 177 aa12.66□□□□□ -0.38
EDC3-216ENST00000569561 HIST1H1BP16401 226 aaKnown RBP12.66□□□□□ -0.38
EDC3-216ENST00000569561 MECP2P51608 486 aaKnown RBP12.66□□□□□ -0.38
EDC3-216ENST00000569561 TAS2R19P59542 299 aa12.66□□□□□ -0.38
EDC3-216ENST00000569561 RPEL1Q2QD12 228 aa12.66□□□□□ -0.38
EDC3-216ENST00000569561 FAM209BQ5JX69 171 aa12.66□□□□□ -0.38
EDC3-216ENST00000569561 ADAMTSL5Q6ZMM2 481 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms