RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 ZNF257Q9Y2Q1 563 aa10.11□□□□□ -0.79
CLK3-224ENST00000568605 V9GYH0 126 aa10.11□□□□□ -0.79
CLK3-224ENST00000568605 SNAPC5O75971 98 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 CTSDP07339 412 aaPredicted RBP10.1□□□□□ -0.79
CLK3-224ENST00000568605 ZNF735P0CB33 412 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 APELAP0DMC3 54 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 ETV6P41212 452 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 FHL3Q13643 280 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 C10orf55Q5SWW7 151 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 SAMD5Q5TGI4 173 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 CCDC190Q86UF4 302 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 CADM3Q8N126 398 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 TOMM5Q8N4H5 51 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 WFDC9Q8NEX5 89 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 OR11H1Q8NG94 326 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 MARCH1Q8TCQ1 289 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 CASTOR1Q8WTX7 329 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 FYTTD1Q96QD9 318 aaKnown RBP10.1□□□□□ -0.79
CLK3-224ENST00000568605 THAP7Q9BT49 309 aaPredicted RBP10.1□□□□□ -0.79
CLK3-224ENST00000568605 GNB4Q9HAV0 340 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 MCUBQ9NWR8 336 aa10.1□□□□□ -0.79
CLK3-224ENST00000568605 FAM223BA6NKX1 122 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 NPIPB5A8MRT5 1133 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 I3L521 148 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 UPK2O00526 184 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 CYB5BO43169 146 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 KRASP01116 189 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 PI3P19957 117 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 G6PCP35575 357 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 INPP1P49441 399 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 AKR1C2P52895 323 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 ZNF79Q15937 498 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 ASPHD1Q5U4P2 390 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 HSD17B13Q7Z5P4 300 aaPredicted RBP10.09□□□□□ -0.79
CLK3-224ENST00000568605 FAM223AQ8IWN6 122 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 ADAD2Q8NCV1 583 aaKnown RBP10.09□□□□□ -0.79
CLK3-224ENST00000568605 OR51S1Q8NGJ8 323 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 TRIM63Q969Q1 353 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 USMG5Q96IX5 58 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 OR5B12Q96R08 314 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 SRSF8Q9BRL6 282 aaKnown RBP10.09□□□□□ -0.79
CLK3-224ENST00000568605 FKBP11Q9NYL4 201 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 PRNDQ9UKY0 176 aa10.09□□□□□ -0.79
CLK3-224ENST00000568605 C3orf85A0A1B0GTC6 90 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 G3V4G9 280 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 KIAA0141Q14154 515 aaPredicted RBP10.08□□□□□ -0.8
CLK3-224ENST00000568605 ZNF585BQ52M93 769 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 FAM209BQ5JX69 171 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 TRIQKQ629K1 86 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 H2BFWTQ7Z2G1 175 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 C1QL4Q86Z23 238 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 TTC9CQ8N5M4 171 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 OR6Q1Q8NGQ2 317 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 OR1N2Q8NGR9 330 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 RNASE11Q8TAA1 199 aaKnown RBP10.08□□□□□ -0.8
CLK3-224ENST00000568605 DUX3Q96PT4 197 aa10.08□□□□□ -0.8
CLK3-224ENST00000568605 QTRT1Q9BXR0 403 aaKnown RBP10.08□□□□□ -0.8
CLK3-224ENST00000568605 TEX13DA0A0J9YY54 714 aaPredicted RBP10.07□□□□□ -0.8
CLK3-224ENST00000568605 TEX22C9J3V5 150 aa10.07□□□□□ -0.8
CLK3-224ENST00000568605 LINC01619G3V211 115 aa10.07□□□□□ -0.8
CLK3-224ENST00000568605 IGHV3-11P01762 117 aa10.07□□□□□ -0.8
CLK3-224ENST00000568605 IGLL1P15814 213 aa10.07□□□□□ -0.8
CLK3-224ENST00000568605 HIST1H1BP16401 226 aaKnown RBP10.07□□□□□ -0.8
CLK3-224ENST00000568605 TRIM16LQ309B1 348 aa10.07□□□□□ -0.8
CLK3-224ENST00000568605 BEAN1Q3B7T3 259 aa10.07□□□□□ -0.8
CLK3-224ENST00000568605 ZNF57Q68EA5 555 aaPredicted RBP10.07□□□□□ -0.8
CLK3-224ENST00000568605 NECAP1Q8NC96 275 aa10.07□□□□□ -0.8
CLK3-224ENST00000568605 OR1L8Q8NGR8 309 aa10.07□□□□□ -0.8
CLK3-224ENST00000568605 OR4A16Q8NH70 328 aa10.07□□□□□ -0.8
CLK3-224ENST00000568605 RANGRFQ9HD47 186 aaPredicted RBP10.07□□□□□ -0.8
CLK3-224ENST00000568605 ZMAT5Q9UDW3 170 aaKnown RBP10.07□□□□□ -0.8
CLK3-224ENST00000568605 PIGBOS1A0A0B4J2F0 54 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 HMX3A6NHT5 357 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 C15orf61A6NNL5 157 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 RBMXL2O75526 392 aaKnown RBP10.06□□□□□ -0.8
CLK3-224ENST00000568605 HSPB1P04792 205 aaKnown RBP10.06□□□□□ -0.8
CLK3-224ENST00000568605 IL6RP08887 468 aaPredicted RBP10.06□□□□□ -0.8
CLK3-224ENST00000568605 TRAPPC2P0DI81 140 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 TRAPPC2BP0DI82 140 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 DEFA4P12838 97 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 ZP3P21754 424 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 PSMB6P28072 239 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 OR2B8PP59922 312 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 RHOGP84095 191 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 DEFA6Q01524 100 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 KLF9Q13886 244 aaPredicted RBP10.06□□□□□ -0.8
CLK3-224ENST00000568605 OXLD1Q5BKU9 147 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 KPRPQ5T749 579 aaPredicted RBP10.06□□□□□ -0.8
CLK3-224ENST00000568605 C9orf66Q5T8R8 295 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 FOXB2Q5VYV0 432 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 REC114Q7Z4M0 266 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 GDPD1Q8N9F7 314 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 OR5B3Q8NH48 314 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 LSM10Q969L4 123 aaKnown RBP10.06□□□□□ -0.8
CLK3-224ENST00000568605 MRGPRFQ96AM1 343 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 SEC22AQ96IW7 307 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 TMEM56Q96MV1 263 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 TP53RKQ96S44 253 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 SRRQ9GZT4 340 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 NAA60Q9H7X0 242 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms