RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 IL6P05231 212 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 KDELR1P24390 212 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 SLCO1A2P46721 670 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 SERPINB9P50453 376 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 MRPS25P82663 173 aaKnown RBP2.64□□□□□ -1.99
CNOT1-209ENST00000566240 HPCAP84074 193 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 OR8G1Q15617 311 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 DEFB134Q4QY38 66 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 BRMS1LQ5PSV4 323 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 ATP5L2Q7Z4Y8 100 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 CTAGE3PQ8IX95 158 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 Q8NAQ8 132 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 PIGXQ8TBF5 258 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 HAVCR2Q8TDQ0 301 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 RNF133Q8WVZ7 376 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 TMBIM1Q969X1 311 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 CHMP6Q96FZ7 201 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 SLC25A44Q96H78 314 aaPredicted RBP2.64□□□□□ -1.99
CNOT1-209ENST00000566240 PAIP2Q9BPZ3 127 aaKnown RBP2.64□□□□□ -1.99
CNOT1-209ENST00000566240 RTBDNQ9BSG5 229 aaPredicted RBP2.64□□□□□ -1.99
CNOT1-209ENST00000566240 SNRNP25Q9BV90 132 aaKnown RBP2.64□□□□□ -1.99
CNOT1-209ENST00000566240 TMEM109Q9BVC6 243 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 GNB1LQ9BYB4 327 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 FAM96AQ9H5X1 160 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 MRPS16Q9Y3D3 137 aaKnown RBP2.64□□□□□ -1.99
CNOT1-209ENST00000566240 FIS1Q9Y3D6 152 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 HDGFL3Q9Y3E1 203 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 MICAL3Q7RTP6 2002 aa2.64□□□□□ -1.99
CNOT1-209ENST00000566240 TEX50A0A1B0GTY4 177 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 A0A1B0GU33 70 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 CXCR6O00574 342 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 STK16O75716 305 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 DCTN3O75935 186 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 FAM107AO95990 144 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 CDK2P24941 298 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 CRABP1P29762 137 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 CD52P31358 61 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 OR1E2P47887 323 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 CXCR4P61073 352 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 TMEM267Q0VDI3 215 aaPredicted RBP2.63□□□□□ -1.99
CNOT1-209ENST00000566240 BAMBIQ13145 260 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 PYDC2Q56P42 97 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 ALKAL1Q6UXT8 129 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 HS3ST5Q8IZT8 346 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 DEFB106AQ8N104 65 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 C12orf29Q8N999 325 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 DNAAF3Q8N9W5 541 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 JOSD2Q8TAC2 188 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 CD200R1Q8TD46 325 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 ABHD14BQ96IU4 210 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 IGF2BP2-AS1Q96M15 143 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 MAP1LC3AQ9H492 121 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 TRABDQ9H4I3 376 aa2.63□□□□□ -1.99
CNOT1-209ENST00000566240 COL4A4P53420 1690 aaPredicted RBP2.63□□□□□ -1.99
CNOT1-209ENST00000566240 HELZP42694 1942 aaKnown RBP2.62□□□□□ -1.99
CNOT1-209ENST00000566240 ZNF638Q14966 1978 aaKnown RBP2.62□□□□□ -1.99
CNOT1-209ENST00000566240 IGKV2-24A0A0C4DH68 120 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 C21orf140B9A014 251 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 SYNGR2O43760 224 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 MFSD11O43934 449 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 ARPP19P56211 112 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 LINC00313P59037 77 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 PPP1R1AQ13522 171 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 IHHQ14623 411 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 EBPQ15125 230 aaKnown RBP2.62□□□□□ -1.99
CNOT1-209ENST00000566240 ACSBG2Q5FVE4 666 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 SPANXN3Q5MJ09 141 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 NCBP2-AS2Q69YL0 99 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 TNFAIP8L2Q6P589 184 aaPredicted RBP2.62□□□□□ -1.99
CNOT1-209ENST00000566240 LRRN1Q6UXK5 716 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 C3orf62Q6ZUJ4 267 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 LYPD6Q86Y78 171 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 ZFAND2AQ8N6M9 145 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 LINC00304Q8N9R0 145 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 CARHSP1Q9Y2V2 147 aaKnown RBP2.62□□□□□ -1.99
CNOT1-209ENST00000566240 LTBP2Q14767 1821 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 ANKRD36A6QL64 1941 aa2.62□□□□□ -1.99
CNOT1-209ENST00000566240 PLXNA4Q9HCM2 1894 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 TRAV8-1A0A0A6YYK1 113 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 A0A1W2PNN7 141 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 LINC00862A6NCI5 91 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 MRASO14807 208 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 DEDDO75618 318 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 ATP5HO75947 161 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 IGLV3-27P01718 113 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 IGLV6-57P01721 117 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 SHBGP04278 402 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 OR4A8P0C604 315 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 NQO1P15559 274 aaKnown RBP2.61□□□□□ -1.99
CNOT1-209ENST00000566240 RPL22P35268 128 aaKnown RBP2.61□□□□□ -1.99
CNOT1-209ENST00000566240 PPP1CCP36873 323 aaKnown RBP2.61□□□□□ -1.99
CNOT1-209ENST00000566240 AKR1C2P52895 323 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 AP2S1P53680 142 aaPredicted RBP2.61□□□□□ -1.99
CNOT1-209ENST00000566240 HERVK_113P63121 156 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 SLC35A2P78381 396 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 SPIN4Q56A73 249 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 SCXQ7RTU7 201 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 TAC4Q86UU9 113 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 NAA40Q86UY6 237 aa2.61□□□□□ -1.99
CNOT1-209ENST00000566240 ZNF664Q8N3J9 261 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms