RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ZNF787Q6DD87 383 aa15.77■□□□□ 0.12
CLN6-205ENST00000564846 SCGB1C1Q8TD33 95 aa15.77■□□□□ 0.12
CLN6-205ENST00000564846 PARD6GQ9BYG4 376 aaPredicted RBP15.77■□□□□ 0.12
CLN6-205ENST00000564846 COMMD5Q9GZQ3 224 aa15.77■□□□□ 0.12
CLN6-205ENST00000564846 PLEKHA3Q9HB20 300 aa15.77■□□□□ 0.12
CLN6-205ENST00000564846 MINOS1-NBL1R4GNA1 71 aa15.77■□□□□ 0.12
CLN6-205ENST00000564846 IGHV4-30-2A0A087WSY4 118 aa15.77■□□□□ 0.11
CLN6-205ENST00000564846 J3QKU1 62 aa15.77■□□□□ 0.11
CLN6-205ENST00000564846 OR8U8P0C7N1 319 aa15.77■□□□□ 0.11
CLN6-205ENST00000564846 TEX45Q8NA69 505 aa15.77■□□□□ 0.11
CLN6-205ENST00000564846 PLA2G2EQ9NZK7 142 aa15.77■□□□□ 0.11
CLN6-205ENST00000564846 ARHGAP32A7KAX9 2087 aa15.76■□□□□ 0.11
CLN6-205ENST00000564846 OOSP1A8MZH6 123 aa15.76■□□□□ 0.11
CLN6-205ENST00000564846 BLOC1S1P78537 153 aa15.76■□□□□ 0.11
CLN6-205ENST00000564846 CCDC144NLQ6NUI1 221 aa15.76■□□□□ 0.11
CLN6-205ENST00000564846 OR2G3Q8NGZ4 309 aa15.76■□□□□ 0.11
CLN6-205ENST00000564846 RITA1Q96K30 269 aa15.76■□□□□ 0.11
CLN6-205ENST00000564846 TMEM147Q9BVK8 224 aa15.76■□□□□ 0.11
CLN6-205ENST00000564846 MFSD2BA6NFX1 497 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 UMAD1C9J7I0 102 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 SLC25A17O43808 307 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 MYOD1P15172 320 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 CD1BP29016 333 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 UBE2E1P51965 193 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 RAB11AP62491 216 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 HABP2Q14520 560 aaPredicted RBP15.75■□□□□ 0.11
CLN6-205ENST00000564846 LRRC75BQ2VPJ9 315 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 LHFPL4Q7Z7J7 247 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 OR1L8Q8NGR8 309 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 TBX15Q96SF7 602 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 HINT2Q9BX68 163 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 HILPDAQ9Y5L2 63 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 TRIM77I1YAP6 450 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 TIMM23O14925 209 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 F2RL1P55085 397 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 ATP5IP56385 69 aaPredicted RBP15.75■□□□□ 0.11
CLN6-205ENST00000564846 LGALS4P56470 323 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 ETV3LQ6ZN32 361 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 HSD17B13Q7Z5P4 300 aaPredicted RBP15.75■□□□□ 0.11
CLN6-205ENST00000564846 SLC24A4Q8NFF2 622 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 REG4Q9BYZ8 158 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 WDR61Q9GZS3 305 aaKnown RBP15.75■□□□□ 0.11
CLN6-205ENST00000564846 PARP11Q9NR21 331 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 UQCC1Q9NVA1 299 aa15.75■□□□□ 0.11
CLN6-205ENST00000564846 TBL2Q9Y4P3 447 aaKnown RBP15.75■□□□□ 0.11
CLN6-205ENST00000564846 COL8A1P27658 744 aa15.74■□□□□ 0.11
CLN6-205ENST00000564846 RUNX1Q01196 453 aa15.74■□□□□ 0.11
CLN6-205ENST00000564846 VWC2Q2TAL6 325 aa15.74■□□□□ 0.11
CLN6-205ENST00000564846 GGACTQ9BVM4 153 aa15.74■□□□□ 0.11
CLN6-205ENST00000564846 ZNF430Q9H8G1 570 aaPredicted RBP15.74■□□□□ 0.11
CLN6-205ENST00000564846 NDUFA4L2Q9NRX3 87 aa15.74■□□□□ 0.11
CLN6-205ENST00000564846 CHD6Q8TD26 2715 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 ANKRD34BA5PLL1 514 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 INS-IGF2F8WCM5 200 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 RRHO14718 337 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 VENTXO95231 258 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 OPN1MWP04001 364 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 CRYGBP07316 175 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 OPN1MW2P0DN77 364 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 OPN1MW3P0DN78 364 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 NPY1RP25929 384 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 PSG5Q15238 335 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 AANATQ16613 207 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 PXDC1Q5TGL8 231 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 TMEM182Q6ZP80 229 aaPredicted RBP15.73■□□□□ 0.11
CLN6-205ENST00000564846 THNSL2Q86YJ6 484 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 EIF4E3Q8N5X7 224 aaKnown RBP15.73■□□□□ 0.11
CLN6-205ENST00000564846 CFHR4Q92496 578 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 PSMG3Q9BT73 122 aaPredicted RBP15.73■□□□□ 0.11
CLN6-205ENST00000564846 LPAR2Q9HBW0 351 aa15.73■□□□□ 0.11
CLN6-205ENST00000564846 UBE2L5PA0A1B0GUS4 154 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 A0A1W2PN81 502 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 A0A1W2PRD5 423 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 A0A1W2PRF3 423 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 A0A1W2PRM7 423 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 NUDT19A8MXV4 375 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 PRH1P02810 166 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 SLC25A16P16260 332 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 CHRNA7P36544 502 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 PAX8Q06710 450 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 Q6ZRG5 221 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 MMD2Q8IY49 270 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 UTP20O75691 2785 aaKnown RBP15.72■□□□□ 0.11
CLN6-205ENST00000564846 IFNA4P05014 189 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 SSX2Q16385 188 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 CLEC12BQ2HXU8 276 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 TMEM170AQ8WVE7 144 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 TAF15Q92804 592 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLN6-205ENST00000564846 MARC2Q969Z3 335 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 SIGLEC9Q9Y336 463 aa15.72■□□□□ 0.11
CLN6-205ENST00000564846 TET2Q6N021 2002 aaPredicted RBP15.71■□□□□ 0.11
CLN6-205ENST00000564846 TEX46H3BTG2 121 aa15.71■□□□□ 0.11
CLN6-205ENST00000564846 MAS1LP35410 378 aa15.71■□□□□ 0.11
CLN6-205ENST00000564846 CAMLGP49069 296 aa15.71■□□□□ 0.11
CLN6-205ENST00000564846 PRSS8Q16651 343 aa15.71■□□□□ 0.11
CLN6-205ENST00000564846 TPSG1Q9NRR2 321 aa15.71■□□□□ 0.11
CLN6-205ENST00000564846 TIMM9Q9Y5J7 89 aa15.71■□□□□ 0.11
CLN6-205ENST00000564846 PRSS46E5RG02 174 aa15.7■□□□□ 0.1
CLN6-205ENST00000564846 MOSP00540 346 aa15.7■□□□□ 0.1
CLN6-205ENST00000564846 CA2P00918 260 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms