RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 HCFC1P51610 2035 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 MGAQ8IWI9 3026 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 C7orf77A4D0Y5 90 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 IFNA17P01571 189 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 GYPAP02724 150 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 S100A9P06702 114 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 SRP19P09132 144 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 OR9G9P0C7N8 305 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 NFYBP25208 207 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 POU2AF1Q16633 256 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 RNF212Q495C1 297 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 PRAMEF5Q5TYX0 476 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 OR8G2PQ6IF36 304 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 ZNF439Q8NDP4 499 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 CLCC1Q96S66 551 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 P2RX4Q99571 388 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 CCL13Q99616 98 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 AIFM2Q9BRQ8 373 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 SRD5A3Q9H8P0 318 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 RPS10P5Q9NQ39 176 aa5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 CISD1Q9NZ45 108 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 RPUSD1Q9UJJ7 312 aaKnown RBP5.96□□□□□ -1.46
HERPUD1-209ENST00000564678 BSNQ9UPA5 3926 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 DSPP15924 2871 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 PPIAL4EA0A075B759 164 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 MED19A0JLT2 244 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 COLCA2A8K830 154 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 C17orf112F2Z3M2 114 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 PPIAL4DF5H284 164 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 PPIAL4FP0DN26 164 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 OR13C7P0DN81 318 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 FOLR2P14207 255 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 CTRB1P17538 263 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 MDKP21741 143 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 LINC00205P59089 165 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 CCL8P80075 99 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 MRPS11P82912 194 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 NHLH1Q02575 133 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 ICAM4Q14773 271 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 AWAT1Q58HT5 328 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 RPL39P5Q59GN2 51 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 NCMAPQ5T1S8 102 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 CTRB2Q6GPI1 263 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 RBMS3Q6XE24 437 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 SLC25A48Q6ZT89 311 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 DEFB108BQ8NET1 73 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 RNASE6Q93091 150 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 WFIKKN1Q96NZ8 548 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 GAL3ST2Q9H3Q3 398 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 SLC39A9Q9NUM3 307 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 PPIAL4AQ9Y536 164 aa5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 MAP1BP46821 2468 aaKnown RBP5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 RP1L1Q8IWN7 2480 aaPredicted RBP5.95□□□□□ -1.46
HERPUD1-209ENST00000564678 SAA2-SAA4A0A096LPE2 208 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 TRGV8A0A0C4DH27 118 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 UBE2L5PA0A1B0GUS4 154 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 A0A1B0GV50 99 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 MEX3AA1L020 520 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 TMEM178BH3BS89 294 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 M0R036 132 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 WIPF1O43516 503 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 NDUFA2O43678 99 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 MPDU1O75352 247 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 HRASP01112 189 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 IFNA1P01562 189 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 MT-ND4LP03901 98 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 ARG1P05089 322 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 SAA2P0DJI9 122 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 Q5PR19 223 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 AVPI1Q5T686 147 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 ZNF787Q6DD87 383 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 TCF23Q7RTU1 214 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 ZNF709Q8N972 641 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 SLC24A4Q8NFF2 622 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 RAB39BQ96DA2 213 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 QTRT1Q9BXR0 403 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 MLXQ9UH92 298 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 A0A087WWC5 75 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 C15orf62A8K5M9 175 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 TNFRSF13BO14836 293 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 SLC31A2O15432 143 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 BCL2P10415 239 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 DAOP14920 347 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 APOBEC3AP31941 199 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 VDAC2P45880 294 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 OR2B8PP59922 312 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 RAB11AP62491 216 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 EFNB3Q15768 340 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 ZNF726P1Q15940 193 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 HAGHQ16775 308 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 FBXL19-AS1Q494R0 122 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 SMUG1Q53HV7 270 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 ACSM6Q6P461 480 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 HEPN1Q6WQI6 88 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 RPP25LQ8N5L8 163 aaKnown RBP5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 FAM216BQ8N7L0 139 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 VSIRQ9H7M9 311 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 KAAG1Q9UBP8 84 aa5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 FOXA2Q9Y261 457 aaPredicted RBP5.94□□□□□ -1.46
HERPUD1-209ENST00000564678 AKAP13Q12802 2813 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms