RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 CADM3Q8N126 398 aa11.35□□□□□ -0.59
SPG7-210ENST00000564409 COMMD5Q9GZQ3 224 aa11.35□□□□□ -0.59
SPG7-210ENST00000564409 VCX3AQ9NNX9 186 aa11.35□□□□□ -0.59
SPG7-210ENST00000564409 IFT46Q9NQC8 304 aa11.35□□□□□ -0.59
SPG7-210ENST00000564409 COMMD9Q9P000 198 aa11.35□□□□□ -0.59
SPG7-210ENST00000564409 IGLV11-55A0A075B6I3 123 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 A0A1B0GW64 132 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 A8MWP6 167 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 PPP5D1E7EU14 171 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 SULT1C2O00338 296 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 TNFSF12O43508 249 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 OR2C1O95371 312 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 AREGP15514 252 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 TAS2R46P59540 309 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 OR2B8PP59922 312 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 CD81P60033 236 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 UBE2NLQ5JXB2 153 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 ADAMTSL5Q6ZMM2 481 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 CCDC140Q96MF4 163 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 NEURL2Q9BR09 285 aa11.34□□□□□ -0.59
SPG7-210ENST00000564409 UPK2O00526 184 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 NDUFB8O95169 186 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 PTHLHP12272 177 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 CBLN1P23435 193 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 FXYD4P59646 89 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 CLEC19AQ6UXS0 136 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 LINC00322Q6ZN03 302 aaPredicted RBP11.33□□□□□ -0.6
SPG7-210ENST00000564409 ZNF818PQ6ZRF7 136 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 DMBX1Q8NFW5 382 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 IL17DQ8TAD2 202 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 MARC2Q969Z3 335 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 GPHA2Q96T91 129 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 ANAPC10Q9UM13 185 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 CEPT1Q9Y6K0 416 aa11.33□□□□□ -0.6
SPG7-210ENST00000564409 A0A087WXM4 84 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 NAT1P18440 290 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 GNRHRP30968 328 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 ERVK-16P61578 105 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 ANKRD55Q3KP44 614 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 TMEM69Q5SWH9 247 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 AADACL3Q5VUY0 350 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 SLC16A13Q7RTY0 426 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 CMTM1Q8IZ96 169 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 MOB3AQ96BX8 217 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 ATP6V0BQ99437 205 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 QTRT1Q9BXR0 403 aaKnown RBP11.32□□□□□ -0.6
SPG7-210ENST00000564409 EHFQ9NZC4 300 aa11.32□□□□□ -0.6
SPG7-210ENST00000564409 IGLC7A0M8Q6 106 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 ZNF320A2RRD8 509 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 CGB1A6NKQ9 187 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 HLA-AP01891 365 aaKnown RBP11.31□□□□□ -0.6
SPG7-210ENST00000564409 CLEC3BP05452 202 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 F2RP25116 425 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 PTBP1P26599 531 aaKnown RBP eCLIP11.31□□□□□ -0.6
SPG7-210ENST00000564409 RPS19P39019 145 aaKnown RBP11.31□□□□□ -0.6
SPG7-210ENST00000564409 ELLP55199 621 aaPredicted RBP11.31□□□□□ -0.6
SPG7-210ENST00000564409 GUCA2BQ16661 112 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 ZNF57Q68EA5 555 aaPredicted RBP11.31□□□□□ -0.6
SPG7-210ENST00000564409 TMEM17Q86X19 198 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 SAMD12Q8N8I0 201 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 OR5H2Q8NGV7 314 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 OR51H1Q8NH63 302 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 VN1R17PQ8TDU5 208 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 CMTM3Q96MX0 182 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 PLEKHA3Q9HB20 300 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 TMEM140Q9NV12 185 aa11.31□□□□□ -0.6
SPG7-210ENST00000564409 HUWE1Q7Z6Z7 4374 aaKnown RBP11.31□□□□□ -0.6
SPG7-210ENST00000564409 TRAV25A0A0B4J276 109 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 TMEM213A2RRL7 107 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 TNFAIP8O95379 198 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 TRAPPC2P0DI81 140 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 TRAPPC2BP0DI82 140 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 PRSS3P35030 304 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 LPCAT3Q6P1A2 487 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 C19orf35Q6ZS72 473 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 GDPD1Q8N9F7 314 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 OR1L8Q8NGR8 309 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 OR6F1Q8NGZ6 308 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 ZNF502Q8TBZ5 544 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 YIPF6Q96EC8 236 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 ZNF2Q9BSG1 426 aaPredicted RBP11.3□□□□□ -0.6
SPG7-210ENST00000564409 HIPK2Q9H2X6 1198 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 FAM212BQ9NTI7 297 aaPredicted RBP11.3□□□□□ -0.6
SPG7-210ENST00000564409 FKBP11Q9NYL4 201 aa11.3□□□□□ -0.6
SPG7-210ENST00000564409 DNAH7Q8WXX0 4024 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 LCE6AA0A183 80 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 MEIS3P1A6NDR6 274 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 MARCH11A6NNE9 402 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 PGLYRP1O75594 196 aaPredicted RBP11.29□□□□□ -0.6
SPG7-210ENST00000564409 S1PR2O95136 353 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 IGHV3-23P01764 117 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 REG1AP05451 166 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 SERPINE2P07093 398 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 CD7P09564 240 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 C8orf88P0DMB2 117 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 MYOD1P15172 320 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 S100GP29377 79 aa11.29□□□□□ -0.6
SPG7-210ENST00000564409 RFX2P48378 723 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms