RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 UBE2G1P62253 170 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 FAM27E3Q08E93 113 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 DMRTA1Q5VZB9 504 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 SLC35E4Q6ICL7 350 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 VAMP8Q9BV40 100 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 TPPP3Q9BW30 176 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 QTRT1Q9BXR0 403 aaKnown RBP8.75□□□□□ -1.01
RNF40-204ENST00000563683 TMEM106BQ9NUM4 274 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 CALYQ9NYX4 217 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 EML6Q6ZMW3 1958 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 PIEZO2Q9H5I5 2752 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 ZGRF1Q86YA3 2104 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 BRS3P32247 399 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 LINC00205P59089 165 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 SSX7Q7RTT5 188 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 HARBI1Q96MB7 349 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 TRIOO75962 3097 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 IGKV1-6A0A0C4DH72 117 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 RAB29O14966 203 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 OR5I1Q13606 314 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 ZNF497Q6ZNH5 498 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 RNF138Q8WVD3 245 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 GAL3ST2Q9H3Q3 398 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 ZNF331Q9NQX6 463 aaPredicted RBP8.75□□□□□ -1.01
RNF40-204ENST00000563683 PXMP4Q9Y6I8 212 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 FAM90A26D6RGX4 464 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 C16orf97H3BN30 126 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 OR10J4P0C629 311 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 COX7A1P24310 79 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 TCL1AP56279 114 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 TEPPQ6URK8 271 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 Q6ZRM9 215 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 GP6Q9HCN6 339 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 ASCL3Q9NQ33 180 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 TMEM140Q9NV12 185 aa8.75□□□□□ -1.01
RNF40-204ENST00000563683 IGHV2OR16-5A0A0B4J2B6 119 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 FAM90A27PA6NNH2 459 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 CDX4O14627 284 aaPredicted RBP8.74□□□□□ -1.01
RNF40-204ENST00000563683 SIAH2O43255 324 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 TFF3Q07654 80 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 WFIKKN1Q96NZ8 548 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 HES4Q9HCC6 221 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 NPVFQ9HCQ7 196 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 LRP4O75096 1905 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 COL5A1P20908 1838 aaPredicted RBP8.74□□□□□ -1.01
RNF40-204ENST00000563683 IQCF6A8MYZ5 107 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 J3QW42 95 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 ORM2P19652 201 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 COTL1Q14019 142 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 COLCA1Q6ZS62 124 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 SLC24A4Q8NFF2 622 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 FAM216AQ8WUB2 273 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 A0A1W2PRD5 423 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 A0A1W2PRF3 423 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 A0A1W2PRM7 423 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 IGHV3-48P01763 117 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 THBS3P49746 956 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 ZCCHC24Q8N2G6 241 aaKnown RBP8.74□□□□□ -1.01
RNF40-204ENST00000563683 ADTRPQ96IZ2 230 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 ZNF355PQ9NSJ1 428 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 ZFP30Q9Y2G7 519 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 ZNF835Q9Y2P0 537 aa8.74□□□□□ -1.01
RNF40-204ENST00000563683 IGHV3-72A0A0B4J1Y9 119 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 KIR2DS2P43631 304 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 GNG4P50150 75 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 FOXL1Q12952 345 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 WDR82Q6UXN9 313 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 TEX43Q6ZNM6 134 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 RPP25LQ8N5L8 163 aaKnown RBP8.73□□□□□ -1.01
RNF40-204ENST00000563683 OR10G8Q8NGN5 311 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 SGMS2Q8NHU3 365 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 BLNKQ8WV28 456 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 DIRC2Q96SL1 478 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 OR51B2Q9Y5P1 312 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 IGHV3-21A0A0B4J1V1 117 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 KIAA1324LA8MWY0 1029 aaPredicted RBP8.73□□□□□ -1.01
RNF40-204ENST00000563683 RPL15P61313 204 aaKnown RBP8.73□□□□□ -1.01
RNF40-204ENST00000563683 C1orf185Q5T7R7 199 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 TMEM256Q8N2U0 113 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 SLC25A10Q9UBX3 287 aaPredicted RBP8.73□□□□□ -1.01
RNF40-204ENST00000563683 SLC45A2Q9UMX9 530 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 MUC6Q6W4X9 2439 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 FCN1O00602 326 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 IGKV1-5P01602 117 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 CT45A6P0DMU7 189 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 CT45A5P0DMU8 189 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 CT45A7P0DMV0 189 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 LGALS4P56470 323 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 VMA21Q3ZAQ7 101 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 CT45A1Q5HYN5 189 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 LRP11Q86VZ4 500 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 CT45A3Q8NHU0 189 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 NAT8BQ9UHF3 227 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 METRNQ9UJH8 293 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 TCF19Q9Y242 345 aa8.73□□□□□ -1.01
RNF40-204ENST00000563683 IL6RP08887 468 aaPredicted RBP8.72□□□□□ -1.01
RNF40-204ENST00000563683 FAM53AQ6NSI3 398 aaPredicted RBP8.72□□□□□ -1.01
RNF40-204ENST00000563683 Q6ZPA2 131 aa8.72□□□□□ -1.01
RNF40-204ENST00000563683 MDS2Q8NDY4 140 aa8.72□□□□□ -1.01
RNF40-204ENST00000563683 CUL9Q8IWT3 2517 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms