RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 OR5I1Q13606 314 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 MMD2Q8IY49 270 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 STPG3Q8N7X2 389 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 S1PR3Q99500 378 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 TMEM140Q9NV12 185 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 TCF19Q9Y242 345 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 FAM90A9PA6NNJ1 464 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 LAMTOR5O43504 91 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 HCFC1P51610 2035 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 LGALS4P56470 323 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 TEPPQ6URK8 271 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 OR8I2Q8N0Y5 310 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 EAF1Q96JC9 268 aaPredicted RBP11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 TMEM208Q9BTX3 173 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 PRSS46E5RG02 174 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 ACTL6BO94805 426 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 CD46P15529 392 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 HOXC12P31275 282 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 RELBQ01201 579 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 RAB31Q13636 194 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 CD177Q8N6Q3 437 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 SIGLECL1Q8N7X8 197 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 OR52E5Q8NH55 327 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 LRRC29Q8WV35 223 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 LRFN3Q9BTN0 628 aa11.56□□□□□ -0.56
VPS9D1-202ENST00000561976 WISP2O76076 250 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 CGAP01215 116 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 PRDX2P32119 198 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 TMPRSS3P57727 454 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 KRTDAPP60985 99 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 AARDQ4LEZ3 155 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 MORN2Q502X0 79 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 PEAR1Q5VY43 1037 aaPredicted RBP11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 INO80CQ6PI98 192 aaPredicted RBP11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 TRAT1Q6PIZ9 186 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 HINT2Q9BX68 163 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 SPRY4Q9C004 299 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 GOLT1BQ9Y3E0 138 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 DLEU1O43261 78 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 ESDP10768 282 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 ARSJQ5FYB0 599 aaPredicted RBP11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 ENY2Q9NPA8 101 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 NAT8BQ9UHF3 227 aa11.55□□□□□ -0.56
VPS9D1-202ENST00000561976 TRGV10A0A0A0MS01 117 aa11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 NPY1RP25929 384 aa11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 GNG4P50150 75 aa11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 TNFSF10P50591 281 aa11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 RNFT1Q5M7Z0 435 aa11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 TMEM164Q5U3C3 297 aa11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 CNEP1R1Q8N9A8 125 aa11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 MDS2Q8NDY4 140 aa11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 LSM4Q9Y4Z0 139 aaKnown RBP11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 C9JCJ5 164 aa11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 C1orf159Q96HA4 380 aa11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 CDX2Q99626 313 aaPredicted RBP11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 OPN3Q9H1Y3 402 aaPredicted RBP11.54□□□□□ -0.56
VPS9D1-202ENST00000561976 HELTA6NFD8 242 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 SLC35B1P78383 322 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 RPL19P84098 196 aaKnown RBP11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 Q0VG73 95 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 PSG5Q15238 335 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 CENPWQ5EE01 88 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 MRPL52Q86TS9 123 aaKnown RBP11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 SLC24A4Q8NFF2 622 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 C11orf52Q96A22 123 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 GNB4Q9HAV0 340 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 ZNF586Q9NXT0 402 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 DUSP13Q9UII6 198 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 JPT1Q9UK76 154 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 C21orf140B9A014 251 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 IGFBP2P18065 325 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 CRYBB3P26998 211 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 KIAA1644Q3SXP7 199 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 MIR17HGQ75NE6 70 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 DOLPP1Q86YN1 238 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 ST6GALNAC3Q8NDV1 305 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 V9GYV3 84 aa11.53□□□□□ -0.56
VPS9D1-202ENST00000561976 NPSP0C0P6 89 aa11.52□□□□□ -0.56
VPS9D1-202ENST00000561976 TDGF1P13385 188 aa11.52□□□□□ -0.56
VPS9D1-202ENST00000561976 BRS3P32247 399 aa11.52□□□□□ -0.56
VPS9D1-202ENST00000561976 ZNF134P52741 427 aa11.52□□□□□ -0.56
VPS9D1-202ENST00000561976 PQLC2Q6ZP29 291 aa11.52□□□□□ -0.56
VPS9D1-202ENST00000561976 LEAP2Q969E1 77 aa11.52□□□□□ -0.56
VPS9D1-202ENST00000561976 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.56
VPS9D1-202ENST00000561976 FBXL7Q9UJT9 491 aa11.52□□□□□ -0.56
VPS9D1-202ENST00000561976 LY96Q9Y6Y9 160 aa11.52□□□□□ -0.56
VPS9D1-202ENST00000561976 TRIOBPQ9H2D6 2365 aa11.52□□□□□ -0.57
VPS9D1-202ENST00000561976 TRBV9A0A0B4J1U6 114 aa11.52□□□□□ -0.57
VPS9D1-202ENST00000561976 DIRC3C9JPN6 131 aa11.52□□□□□ -0.57
VPS9D1-202ENST00000561976 CA2P00918 260 aa11.52□□□□□ -0.57
VPS9D1-202ENST00000561976 TCL1AP56279 114 aa11.52□□□□□ -0.57
VPS9D1-202ENST00000561976 FXYD3Q14802 87 aa11.52□□□□□ -0.57
VPS9D1-202ENST00000561976 UBALD2Q8IYN6 164 aa11.52□□□□□ -0.57
VPS9D1-202ENST00000561976 OR4S2Q8NH73 311 aa11.52□□□□□ -0.57
VPS9D1-202ENST00000561976 TRIB1Q96RU8 372 aa11.52□□□□□ -0.57
VPS9D1-202ENST00000561976 RNASE7Q9H1E1 156 aaKnown RBP11.52□□□□□ -0.57
VPS9D1-202ENST00000561976 PRR14LQ5THK1 2151 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 GPX1P07203 203 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 PMCHP20382 165 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 AMTP48728 403 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms