RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 GBGT1Q8N5D6 347 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 C11orf45Q8TAV5 145 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 ZNF502Q8TBZ5 544 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 CHRDL1Q9BU40 450 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 ATG5Q9H1Y0 275 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 MAP6D1Q9H9H5 199 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 PLCXD1Q9NUJ7 323 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 RAB22AQ9UL26 194 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 TP53TG1Q9Y2A0 90 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 MRPS7Q9Y2R9 242 aaKnown RBP8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 PRELID3BQ9Y3B1 194 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 V9GY05 133 aa8.59□□□□□ -1.03
NSMCE1-202ENST00000561960 DNAH11Q96DT5 4516 aa8.58□□□□□ -1.04
NSMCE1-202ENST00000561960 C8orf88P0DMB2 117 aa8.58□□□□□ -1.04
NSMCE1-202ENST00000561960 HLA-GP17693 338 aa8.58□□□□□ -1.04
NSMCE1-202ENST00000561960 RCN1Q15293 331 aa8.58□□□□□ -1.04
NSMCE1-202ENST00000561960 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
NSMCE1-202ENST00000561960 OR4S2Q8NH73 311 aa8.58□□□□□ -1.04
NSMCE1-202ENST00000561960 TMEM167AQ8TBQ9 72 aa8.58□□□□□ -1.04
NSMCE1-202ENST00000561960 RARRES2Q99969 163 aa8.58□□□□□ -1.04
NSMCE1-202ENST00000561960 UFC1Q9Y3C8 167 aa8.58□□□□□ -1.04
NSMCE1-202ENST00000561960 TRBV7-1A0A0A6YYK4 115 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 IGLC7A0M8Q6 106 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 M0R2N4 97 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 SULT1C2O00338 296 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 TGOLN2O43493 480 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 IGHV3-48P01763 117 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 CRYGCP07315 174 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 CD36P16671 472 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 GADD45AP24522 165 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 OR2B8PP59922 312 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 RPL8P62917 257 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 TIMM50Q3ZCQ8 353 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 MFSD4AQ8N468 514 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 SECTM1Q8WVN6 248 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 TMEM190Q8WZ59 177 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 SPAG8Q99932 426 aaPredicted RBP8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 HINT2Q9BX68 163 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 CCDC90BQ9GZT6 254 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 C5orf66Q9H5L9 145 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 MRPL27Q9P0M9 148 aaKnown RBP8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 OR2W1Q9Y3N9 320 aa8.57□□□□□ -1.04
NSMCE1-202ENST00000561960 TRAV25A0A0B4J276 109 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 TMEM235A6NFC5 223 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 UBE2CO00762 179 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 TSPAN4O14817 238 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 DHFRP00374 187 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 CA1P00915 261 aaPredicted RBP8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 HLA-DQB1P01920 261 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 IFNA4P05014 189 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 MFAP2P55001 183 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 EIF4EBP1Q13541 118 aaPredicted RBP8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 CDNFQ49AH0 187 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 LEMD1Q68G75 181 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 SLC25A24Q6NUK1 477 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 ZNF767PQ75MW2 155 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 NR2C2APQ86WQ0 139 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 TMEM217Q8N7C4 229 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 C2CD4CQ8TF44 421 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 GIMAP1Q8WWP7 306 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 RNF2Q99496 336 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 ZNF436Q9C0F3 470 aaPredicted RBP8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 CCL28Q9NRJ3 127 aa8.56□□□□□ -1.04
NSMCE1-202ENST00000561960 HSPG2P98160 4391 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 IGHV3-66A0A0C4DH42 116 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 ARL6IP5O75915 188 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 FXYD4P59646 89 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 IRF3Q14653 427 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 C10orf67Q8IYJ2 551 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 MARC2Q969Z3 335 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 GALNT14Q96FL9 552 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 CXorf58Q96LI9 332 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 CSTL1Q9H114 145 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 APLNQ9ULZ1 77 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 NSG2Q9Y328 171 aa8.55□□□□□ -1.04
NSMCE1-202ENST00000561960 KIR2DL5BA0A0G2JN68 375 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 KIR2DL5BA0A0G2JPC4 375 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 OR4C46A6NHA9 309 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 SSX5O60225 188 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 OR13C7P0DN81 318 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 HIST1H1BP16401 226 aaKnown RBP8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 WT1-ASQ06250 92 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 Q56UQ5 140 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 LAMTOR1Q6IAA8 161 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 ZNF773Q6PK81 442 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 SPAG16Q8N0X2 631 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 KIR2DL5AQ8N109 375 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 FAM24BQ8N5W8 94 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 GVQW1Q8N7I0 195 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 OR51H1Q8NH63 302 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 KIR2DL5BQ8NHK3 375 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 VSTM2AQ8TAG5 236 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 ZNF414Q96IQ9 312 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 SCRT1Q9BWW7 348 aa8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 DAZ1Q9NQZ3 744 aaKnown RBP8.54□□□□□ -1.04
NSMCE1-202ENST00000561960 MEIS3P1A6NDR6 274 aa8.53□□□□□ -1.04
NSMCE1-202ENST00000561960 IFITM5A6NNB3 132 aa8.53□□□□□ -1.04
NSMCE1-202ENST00000561960 MPTX1A8MV57 137 aa8.53□□□□□ -1.04
NSMCE1-202ENST00000561960 F8W735 103 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms