RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 OR51S1Q8NGJ8 323 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 OR1N2Q8NGR9 330 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 BORCS5Q969J3 196 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 FYTTD1Q96QD9 318 aaKnown RBP10.73□□□□□ -0.69
TPM1-230ENST00000561266 SDHCQ99643 169 aaPredicted RBP10.73□□□□□ -0.69
TPM1-230ENST00000561266 HRASLSQ9HDD0 168 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 COMMD9Q9P000 198 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 RABL2AQ9UBK7 228 aaPredicted RBP10.73□□□□□ -0.69
TPM1-230ENST00000561266 RABL2BQ9UNT1 228 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 MARCH11A6NNE9 402 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 REG1AP05451 166 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 LGALS1P09382 135 aaKnown RBP10.72□□□□□ -0.69
TPM1-230ENST00000561266 HLA-GP17693 338 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 SLURP1P55000 103 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 RAB25P57735 213 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 KRTAP10-11P60412 298 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 SP6Q3SY56 376 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 TTC9CQ8N5M4 171 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 DMBX1Q8NFW5 382 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 OR10W1Q8NGF6 305 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 OR4A5Q8NH83 315 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 VSTM2AQ8TAG5 236 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 CD300LFQ8TDQ1 290 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 SEC22AQ96IW7 307 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 C5orf66Q9H5L9 145 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 COA4Q9NYJ1 87 aa10.72□□□□□ -0.69
TPM1-230ENST00000561266 TRBV9A0A0B4J1U6 114 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 TEX50A0A1B0GTY4 177 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 ACTL6BO94805 426 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 BRI3O95415 125 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 PTBP1P26599 531 aaKnown RBP eCLIP10.71□□□□□ -0.697e-7■■■□□ 17
TPM1-230ENST00000561266 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.69
TPM1-230ENST00000561266 MAS1LP35410 378 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 ETV6P41212 452 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 MEF2DQ14814 521 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 DCUN1D4Q92564 292 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 TMEM68Q96MH6 324 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 FANCD2OSQ96PS1 177 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 SRRQ9GZT4 340 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 AKIP1Q9NQ31 210 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 GPR132Q9UNW8 380 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 DMRT1Q9Y5R6 373 aa10.71□□□□□ -0.69
TPM1-230ENST00000561266 IGLC7A0M8Q6 106 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 ANKRD34BA5PLL1 514 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 DISC1C4P0D8 188 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 H3BUA1 57 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 IGKV1-5P01602 117 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 CTSDP07339 412 aaPredicted RBP10.7□□□□□ -0.7
TPM1-230ENST00000561266 S100A5P33763 92 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 ZNF616Q08AN1 781 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 BAK1Q16611 211 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 Q8N402 240 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 DLX4Q92988 240 aaPredicted RBP10.7□□□□□ -0.7
TPM1-230ENST00000561266 TMEM230Q96A57 120 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 ZNF486Q96H40 463 aaPredicted RBP10.7□□□□□ -0.7
TPM1-230ENST00000561266 RCC1LQ96I51 464 aaKnown RBP10.7□□□□□ -0.7
TPM1-230ENST00000561266 SPIN2AQ99865 258 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 SPIN2BQ9BPZ2 258 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 SLA2Q9H6Q3 261 aa10.7□□□□□ -0.7
TPM1-230ENST00000561266 FAM212BQ9NTI7 297 aaPredicted RBP10.7□□□□□ -0.7
TPM1-230ENST00000561266 A0A0G2JRQ6 117 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 C3orf85A0A1B0GTC6 90 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 A6NHS1 94 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 NPIPB5A8MRT5 1133 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 CREBL2O60519 120 aaPredicted RBP10.69□□□□□ -0.7
TPM1-230ENST00000561266 OR2J3O76001 311 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 CRYGCP07315 174 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 P0C879 139 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 CTRB1P17538 263 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 PSMB6P28072 239 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 RHOGP84095 191 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 CTRB2Q6GPI1 263 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 LHFPL5Q8TAF8 219 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 ZFAND1Q8TCF1 268 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 SLC2A8Q9NY64 477 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 PRR13Q9NZ81 148 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 NDUFA13Q9P0J0 144 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 S4R3C0 116 aa10.69□□□□□ -0.7
TPM1-230ENST00000561266 LINC01619G3V211 115 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 H0Y980 276 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 NDUFB8O95169 186 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 HSPB1P04792 205 aaKnown RBP10.68□□□□□ -0.7
TPM1-230ENST00000561266 MFAP2P55001 183 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 ERVK-16P61578 105 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 WT1-ASQ06250 92 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 ZNF343Q6P1L6 599 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 CADM3Q8N126 398 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 GDPD1Q8N9F7 314 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 GLYATL2Q8WU03 294 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 AIFM2Q9BRQ8 373 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 NDUFA4L2Q9NRX3 87 aa10.68□□□□□ -0.7
TPM1-230ENST00000561266 AURKAIP1Q9NWT8 199 aaPredicted RBP10.68□□□□□ -0.7
TPM1-230ENST00000561266 C13orf42A0A1B0GVH6 325 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 IGHV3-23P01764 117 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 OR5AC1P0C628 307 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 UCP1P25874 307 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 CD40LGP29965 261 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 KLK9Q2XQG4 91 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 Q6ZRM9 215 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms