RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 FKBP11Q9NYL4 201 aa10.15□□□□□ -0.78
NEDD8-208ENST00000560427 PRNDQ9UKY0 176 aa10.15□□□□□ -0.78
NEDD8-208ENST00000560427 TEX13DA0A0J9YY54 714 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-208ENST00000560427 CRYM-AS1A6NIL9 109 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 CENPXA8MT69 81 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 NUDT19A8MXV4 375 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 SNAPC5O75971 98 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 OR9G9P0C7N8 305 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 G6PCP35575 357 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 DHODHQ02127 395 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 TRIM16LQ309B1 348 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 ASPHD1Q5U4P2 390 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 HSD17B13Q7Z5P4 300 aaPredicted RBP10.14□□□□□ -0.79
NEDD8-208ENST00000560427 SGPP2Q8IWX5 399 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 KLHL30-AS1Q8NEE0 82 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 GALNT14Q96FL9 552 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 SEC22AQ96IW7 307 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 VSIG4Q9Y279 399 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 KCNIP3Q9Y2W7 256 aa10.14□□□□□ -0.79
NEDD8-208ENST00000560427 NPIPB5A8MRT5 1133 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 TEX22C9J3V5 150 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 PF4P02776 101 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 OR2B8PP59922 312 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 RUNX1Q01196 453 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 RBMS2Q15434 407 aaKnown RBP10.13□□□□□ -0.79
NEDD8-208ENST00000560427 C10orf55Q5SWW7 151 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 HIST2H2BDQ6DRA6 164 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 H2BFWTQ7Z2G1 175 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 TTC9CQ8N5M4 171 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 ZNF491Q8N8L2 437 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 ADAD2Q8NCV1 583 aaKnown RBP10.13□□□□□ -0.79
NEDD8-208ENST00000560427 OR5B3Q8NH48 314 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 WDR12Q9GZL7 423 aaKnown RBP10.13□□□□□ -0.79
NEDD8-208ENST00000560427 TMEM222Q9H0R3 208 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 KLK15Q9H2R5 256 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 ZNF257Q9Y2Q1 563 aa10.13□□□□□ -0.79
NEDD8-208ENST00000560427 MGAM2Q2M2H8 2515 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 A0A0G2JLM5 398 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 C15orf61A6NNL5 157 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 CDS2O95674 445 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 DHFRP00374 187 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 IGKV1-39P01597 117 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 IGKV1D-39P04432 117 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 OR5AC1P0C628 307 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 ANXA3P12429 323 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 MYCNOSP40205 109 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 AKR1C2P52895 323 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 TPPP2P59282 170 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 SRPXP78539 464 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 KIAA0141Q14154 515 aaPredicted RBP10.12□□□□□ -0.79
NEDD8-208ENST00000560427 C8orf86Q6ZUL3 223 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 FAM219AQ8IW50 185 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 MRPL41Q8IXM3 137 aaKnown RBP10.12□□□□□ -0.79
NEDD8-208ENST00000560427 OR5T1Q8NG75 326 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 IL22RA2Q969J5 263 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 QTRT1Q9BXR0 403 aaKnown RBP10.12□□□□□ -0.79
NEDD8-208ENST00000560427 ZNF355PQ9NSJ1 428 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 TMEM14BQ9NUH8 114 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
NEDD8-208ENST00000560427 TRAV3A0A0B4J244 114 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 FAM223BA6NKX1 122 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 TRGV3P03979 118 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 CRYGCP07315 174 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 LGALS1P09382 135 aaKnown RBP10.11□□□□□ -0.79
NEDD8-208ENST00000560427 P0C879 139 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 UBE2MP61081 183 aaKnown RBP10.11□□□□□ -0.79
NEDD8-208ENST00000560427 SP6Q3SY56 376 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 TMEM128Q5BJH2 165 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 LCNL1Q6ZST4 164 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 FAM223AQ8IWN6 122 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 OR1L8Q8NGR8 309 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 OR4A16Q8NH70 328 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 GLYATL2Q8WU03 294 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 RBPMSQ93062 196 aaKnown RBP10.11□□□□□ -0.79
NEDD8-208ENST00000560427 LSM10Q969L4 123 aaKnown RBP10.11□□□□□ -0.79
NEDD8-208ENST00000560427 TMEM230Q96A57 120 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 RRNAD1Q96FB5 475 aaKnown RBP10.11□□□□□ -0.79
NEDD8-208ENST00000560427 USMG5Q96IX5 58 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 TMEM56Q96MV1 263 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 FYTTD1Q96QD9 318 aaKnown RBP10.11□□□□□ -0.79
NEDD8-208ENST00000560427 COA4Q9NYJ1 87 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 TMEM56-RWDD3S4R434 201 aa10.11□□□□□ -0.79
NEDD8-208ENST00000560427 PLXNB1O43157 2135 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 E7EUB6 86 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 I3L521 148 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 NDUFB6O95139 128 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 IGKV1-5P01602 117 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 TRAPPC2P0DI81 140 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 TRAPPC2BP0DI82 140 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 HIST1H1BP16401 226 aaKnown RBP10.1□□□□□ -0.79
NEDD8-208ENST00000560427 PSMB6P28072 239 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 FHL3Q13643 280 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 ZNF846Q147U1 533 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 KLK9Q2XQG4 91 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 FAM209BQ5JX69 171 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 ETV3LQ6ZN32 361 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 C18orf65Q6ZTR6 163 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 TMED4Q7Z7H5 227 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 ZNF429Q86V71 674 aa10.1□□□□□ -0.79
NEDD8-208ENST00000560427 CENPSQ8N2Z9 138 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms