RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 C5orf66Q9H5L9 145 aa14.49□□□□□ -0.09
CASC4-209ENST00000559222 COA4Q9NYJ1 87 aa14.49□□□□□ -0.09
CASC4-209ENST00000559222 VSIG4Q9Y279 399 aa14.49□□□□□ -0.09
CASC4-209ENST00000559222 MEGF8Q7Z7M0 2845 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 DBX1A6NMT0 343 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 CREBL2O60519 120 aaPredicted RBP14.48□□□□□ -0.09
CASC4-209ENST00000559222 ACTL6BO94805 426 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 REG1AP05451 166 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 CTSDP07339 412 aaPredicted RBP14.48□□□□□ -0.09
CASC4-209ENST00000559222 CD33P20138 364 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 MYCNOSP40205 109 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 OR2B8PP59922 312 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 BAK1Q16611 211 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 IZUMO4Q1ZYL8 232 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 WFDC9Q8NEX5 89 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 OR4A5Q8NH83 315 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 ZNF486Q96H40 463 aaPredicted RBP14.48□□□□□ -0.09
CASC4-209ENST00000559222 MCUBQ9NWR8 336 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 SLC2A8Q9NY64 477 aa14.48□□□□□ -0.09
CASC4-209ENST00000559222 H0Y980 276 aa14.47□□□□□ -0.09
CASC4-209ENST00000559222 RAB25P57735 213 aa14.47□□□□□ -0.09
CASC4-209ENST00000559222 FHL3Q13643 280 aa14.47□□□□□ -0.09
CASC4-209ENST00000559222 SPANXN2Q5MJ10 180 aa14.47□□□□□ -0.09
CASC4-209ENST00000559222 OR11H1Q8NG94 326 aa14.47□□□□□ -0.09
CASC4-209ENST00000559222 ZFAND1Q8TCF1 268 aa14.47□□□□□ -0.09
CASC4-209ENST00000559222 TMEM230Q96A57 120 aa14.47□□□□□ -0.09
CASC4-209ENST00000559222 SEC22AQ96IW7 307 aa14.47□□□□□ -0.09
CASC4-209ENST00000559222 GPR132Q9UNW8 380 aa14.47□□□□□ -0.09
CASC4-209ENST00000559222 IGHV4OR15-8A0A075B7B6 117 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 A0A087WW49 117 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 C3orf85A0A1B0GTC6 90 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 IGKV1-5P01602 117 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 LGALS1P09382 135 aaKnown RBP14.46□□□□□ -0.09
CASC4-209ENST00000559222 PTBP1P26599 531 aaKnown RBP eCLIP14.46□□□□□ -0.09
CASC4-209ENST00000559222 S100GP29377 79 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 MAS1LP35410 378 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 ERVK-16P61578 105 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 CNPY1Q3B7I2 92 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 BEAN1Q3B7T3 259 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 TOMM5Q8N4H5 51 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 OR10W1Q8NGF6 305 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 SPIN2AQ99865 258 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 PRRT1Q99946 306 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 SPIN2BQ9BPZ2 258 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 COPZ2Q9P299 210 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 DNAH3Q8TD57 4116 aa14.46□□□□□ -0.09
CASC4-209ENST00000559222 SLC6A1P30531 599 aa14.45□□□□□ -0.1
CASC4-209ENST00000559222 RUNX1Q01196 453 aa14.45□□□□□ -0.1
CASC4-209ENST00000559222 TTC9CQ8N5M4 171 aa14.45□□□□□ -0.1
CASC4-209ENST00000559222 LHFPL5Q8TAF8 219 aa14.45□□□□□ -0.1
CASC4-209ENST00000559222 TMEM68Q96MH6 324 aa14.45□□□□□ -0.1
CASC4-209ENST00000559222 SLA2Q9H6Q3 261 aa14.45□□□□□ -0.1
CASC4-209ENST00000559222 FAM212BQ9NTI7 297 aaPredicted RBP14.45□□□□□ -0.1
CASC4-209ENST00000559222 PRR13Q9NZ81 148 aa14.45□□□□□ -0.1
CASC4-209ENST00000559222 NOTCH1P46531 2555 aa14.45□□□□□ -0.1
CASC4-209ENST00000559222 A0A0G2JRQ6 117 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 TEX50A0A1B0GTY4 177 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 IGLC7A0M8Q6 106 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 H3BUA1 57 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 TRBV12-3P01733 135 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 PRB2P02812 416 aaPredicted RBP14.44□□□□□ -0.1
CASC4-209ENST00000559222 OR5AC1P0C628 307 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 SLURP1P55000 103 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 CCDC71LQ8N9Z2 235 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 OR1N2Q8NGR9 330 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 AIFM2Q9BRQ8 373 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 NAA60Q9H7X0 242 aa14.44□□□□□ -0.1
CASC4-209ENST00000559222 C14orf166Q9Y224 244 aaKnown RBP14.44□□□□□ -0.1
CASC4-209ENST00000559222 SERPINE2P07093 398 aa14.43□□□□□ -0.1
CASC4-209ENST00000559222 P0C879 139 aa14.43□□□□□ -0.1
CASC4-209ENST00000559222 UCP1P25874 307 aa14.43□□□□□ -0.1
CASC4-209ENST00000559222 DEFA6Q01524 100 aa14.43□□□□□ -0.1
CASC4-209ENST00000559222 SURF2Q15527 256 aaPredicted RBP14.43□□□□□ -0.1
CASC4-209ENST00000559222 ZNF57Q68EA5 555 aaPredicted RBP14.43□□□□□ -0.1
CASC4-209ENST00000559222 AKIP1Q9NQ31 210 aa14.43□□□□□ -0.1
CASC4-209ENST00000559222 DMRT1Q9Y5R6 373 aa14.43□□□□□ -0.1
CASC4-209ENST00000559222 NOTCH3Q9UM47 2321 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 TRBV9A0A0B4J1U6 114 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 LINC00854A0A1B0GVQ3 168 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 ANKRD34BA5PLL1 514 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 CRYM-AS1A6NIL9 109 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 C15orf61A6NNL5 157 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 NPIPB5A8MRT5 1133 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 OR2J3O76001 311 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 BRI3O95415 125 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 CTRB1P17538 263 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 PSMB6P28072 239 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 CD40LGP29965 261 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 ECI1P42126 302 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 RHOGP84095 191 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 ZNF616Q08AN1 781 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 CTRB2Q6GPI1 263 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 GDPD1Q8N9F7 314 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 FANCD2OSQ96PS1 177 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 QTRT1Q9BXR0 403 aaKnown RBP14.42□□□□□ -0.1
CASC4-209ENST00000559222 COMMD5Q9GZQ3 224 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 SCP2D1Q9UJQ7 156 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 OR51B2Q9Y5P1 312 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 S4R3C0 116 aa14.42□□□□□ -0.1
CASC4-209ENST00000559222 TEX13DA0A0J9YY54 714 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 553.3 ms