RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 RPL27AP46776 148 aaKnown RBP4.86□□□□□ -1.63
LRRC28-207ENST00000558500 TFPI2P48307 235 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 SERPINB10P48595 397 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 IRF3Q14653 427 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 C12orf74Q32Q52 190 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 SSX9Q7RTT3 188 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 UBE2DNLQ8IWF7 75 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 OR6M1Q8NGM8 313 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 GGHQ92820 318 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 ADTRPQ96IZ2 230 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 PGLYRP3Q96LB9 341 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 Q96MT0 163 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 SLC29A1Q99808 456 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 TMEM59Q9BXS4 323 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 OR51E2Q9H255 320 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 MED4Q9NPJ6 270 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 MRPS18AQ9NVS2 196 aaKnown RBP4.86□□□□□ -1.63
LRRC28-207ENST00000558500 ETV7Q9Y603 341 aa4.86□□□□□ -1.63
LRRC28-207ENST00000558500 SAC3D1A6NKF1 404 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 ZNF705EA8MWA4 302 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-207ENST00000558500 EPM2AB3EWF7 344 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 K7EMT4 169 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 NDUFA4O00483 81 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 BET1O15155 118 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 SOCS1O15524 211 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 REG1AP05451 166 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 INAFM2P0DMQ5 153 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 DEFA4P12838 97 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 MALP21145 153 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 PTBP1P26599 531 aaKnown RBP eCLIP4.85□□□□□ -1.63
LRRC28-207ENST00000558500 ETV1P50549 477 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 PSMD7P51665 324 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 UNC119Q13432 240 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 ZIK1Q3SY52 487 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-207ENST00000558500 IGSF11Q5DX21 431 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 TMPRSS11AQ6ZMR5 421 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 ZNF767PQ75MW2 155 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 VKORC1L1Q8N0U8 176 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 OR4A4PQ8NGN8 299 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 RHOXF1Q8NHV9 184 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 TMEM167AQ8TBQ9 72 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 DERL3Q96Q80 235 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 RNF2Q99496 336 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 DCUN1D5Q9BTE7 237 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 CABLES2Q9BTV7 478 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 KCNK15Q9H427 330 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 FGF20Q9NP95 211 aaPredicted RBP4.85□□□□□ -1.63
LRRC28-207ENST00000558500 SMPXQ9UHP9 88 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 CELA1Q9UNI1 258 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 AP4S1Q9Y587 144 aa4.85□□□□□ -1.63
LRRC28-207ENST00000558500 IGHV3OR16-8A0A075B7F1 116 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 TRBV6-7A0A0A0MS04 114 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 OR2T8A6NH00 312 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 FOXI3A8MTJ6 420 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-207ENST00000558500 TMEM14DPA8MWL7 114 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 GYG2O15488 501 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 FABP7O15540 132 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 ZNF207O43670 478 aaKnown RBP4.84□□□□□ -1.63
LRRC28-207ENST00000558500 FCGR3BO75015 233 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 KBTBD11O94819 623 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 ALPLP05186 524 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 GIG44P09565 113 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-207ENST00000558500 FCGR1AP12314 374 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 CELP19835 753 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 DCKP27707 260 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 MAS1LP35410 378 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 QRFPP83859 136 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 ARFRP1Q13795 201 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 RNF212Q495C1 297 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 DNAL1Q4LDG9 190 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 TMEM41BQ5BJD5 291 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 C1orf100Q5SVJ3 147 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 LIPKQ5VXJ0 399 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 PUSL1Q8N0Z8 303 aaKnown RBP4.84□□□□□ -1.63
LRRC28-207ENST00000558500 ZFP41Q8N8Y5 198 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 OR10J5Q8NHC4 309 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 VSTM2AQ8TAG5 236 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 VN1R17PQ8TDU5 208 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 BSCL2Q96G97 398 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-207ENST00000558500 CENPNQ96H22 339 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-207ENST00000558500 OR2A7Q96R45 310 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 CMSS1Q9BQ75 279 aaKnown RBP4.84□□□□□ -1.63
LRRC28-207ENST00000558500 C20orf24Q9BUV8 137 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 LPAR5Q9H1C0 372 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 HSF4Q9ULV5 492 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 RBM7Q9Y580 266 aaKnown RBP4.84□□□□□ -1.63
LRRC28-207ENST00000558500 ORC6Q9Y5N6 252 aa4.84□□□□□ -1.63
LRRC28-207ENST00000558500 IGKV3-7A0A075B6H7 116 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 IGHV7-4-1A0A0J9YVY3 117 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 CGB1A6NKQ9 187 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 C15orf62A8K5M9 175 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 CHEK1O14757 476 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 DIRAS3O95661 229 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 TMEM50BP56557 158 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 RPL8P62917 257 aaKnown RBP4.83□□□□□ -1.64
LRRC28-207ENST00000558500 TTC23Q5W5X9 447 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 FAM90A2PQ658T7 463 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 LEMD1Q68G75 181 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 MORN3Q6PF18 240 aaPredicted RBP4.83□□□□□ -1.64
LRRC28-207ENST00000558500 SPSB3Q6PJ21 355 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms