RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 M0QYG6 137 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 UPK2O00526 184 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 CYB5BO43169 146 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 GSTZ1O43708 216 aaPredicted RBP6.57□□□□□ -1.36
TPM1-213ENST00000558400 B3GALNT1O75752 331 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 SNAPC5O75971 98 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 ATG12O94817 140 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 RLN1P04808 185 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 IL6RP08887 468 aaPredicted RBP6.57□□□□□ -1.36
TPM1-213ENST00000558400 ZNF735P0CB33 412 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 RPA2P15927 270 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 HLA-GP17693 338 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 ZP3P21754 424 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 PTBP1P26599 531 aaKnown RBP eCLIP6.57□□□□□ -1.36
TPM1-213ENST00000558400 LPAR6P43657 344 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 TATDN3Q17R31 274 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 DEFB136Q30KP8 78 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 ASPHD1Q5U4P2 390 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 FOXB2Q5VYV0 432 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 STEAP1BQ6NZ63 245 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 SSX9Q7RTT3 188 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 HSD17B13Q7Z5P4 300 aaPredicted RBP6.57□□□□□ -1.36
TPM1-213ENST00000558400 LHFPL1Q86WI0 220 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 FAM223AQ8IWN6 122 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 ADAD2Q8NCV1 583 aaKnown RBP6.57□□□□□ -1.36
TPM1-213ENST00000558400 SMIM4Q8WVI0 70 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 SCGB3A2Q96PL1 93 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 GPHA2Q96T91 129 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 TSC22D3Q99576 134 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 COMMD5Q9GZQ3 224 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 GNB4Q9HAV0 340 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 ZNF257Q9Y2Q1 563 aa6.57□□□□□ -1.36
TPM1-213ENST00000558400 TNCP24821 2201 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 MARCH11A6NNE9 402 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 NPIPB5A8MRT5 1133 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 DISC1C4P0D8 188 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 KRASP01116 189 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 SERPINE2P07093 398 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 CRYGCP07315 174 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 AKAIN1P0CW23 69 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 PGAM2P15259 253 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 HIST1H1BP16401 226 aaKnown RBP6.56□□□□□ -1.36
TPM1-213ENST00000558400 RND3P61587 244 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 DGCR2P98153 550 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 ATP5G2Q06055 141 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 EGFEM1PQ0D2K5 195 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 DCTN2Q13561 401 aaKnown RBP6.56□□□□□ -1.36
TPM1-213ENST00000558400 SURF2Q15527 256 aaPredicted RBP6.56□□□□□ -1.36
TPM1-213ENST00000558400 PHLDA2Q53GA4 152 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 ZNF343Q6P1L6 599 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 TBC1D26Q86UD7 250 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 ZNF429Q86V71 674 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 CCDC71LQ8N9Z2 235 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 NECAP1Q8NC96 275 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 CASTOR1Q8WTX7 329 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 DUX3Q96PT4 197 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 FYTTD1Q96QD9 318 aaKnown RBP6.56□□□□□ -1.36
TPM1-213ENST00000558400 OR5B12Q96R08 314 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 PRRT1Q99946 306 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 SOSTQ9BQB4 213 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 FXYD6Q9H0Q3 95 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 TMEM140Q9NV12 185 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 COPZ2Q9P299 210 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 SCP2D1Q9UJQ7 156 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 PRNDQ9UKY0 176 aa6.56□□□□□ -1.36
TPM1-213ENST00000558400 TRBV9A0A0B4J1U6 114 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 SEC14L6B5MCN3 397 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 OVOL1O14753 267 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 S1PR2O95136 353 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 IGHV3-11P01762 117 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 TRAPPC2P0DI81 140 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 TRAPPC2BP0DI82 140 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 DEFA4P12838 97 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 PSMB6P28072 239 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 PIGPP57054 158 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 AP3S2P59780 193 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 RHOGP84095 191 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 KLK9Q2XQG4 91 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 SCGB2B2Q4G0G5 96 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 ZNF585BQ52M93 769 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 RNASE12Q5GAN4 147 aaKnown RBP6.55□□□□□ -1.36
TPM1-213ENST00000558400 H2BFWTQ7Z2G1 175 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 OR1L8Q8NGR8 309 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 DEDD2Q8WXF8 326 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 DCUN1D4Q92564 292 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 THAP7Q9BT49 309 aaPredicted RBP6.55□□□□□ -1.36
TPM1-213ENST00000558400 ELOVL1Q9BW60 279 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 QTRT1Q9BXR0 403 aaKnown RBP6.55□□□□□ -1.36
TPM1-213ENST00000558400 THYN1Q9P016 225 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 PEF1Q9UBV8 284 aaKnown RBP6.55□□□□□ -1.36
TPM1-213ENST00000558400 KLK9Q9UKQ9 250 aa6.55□□□□□ -1.36
TPM1-213ENST00000558400 C14orf166Q9Y224 244 aaKnown RBP6.55□□□□□ -1.36
TPM1-213ENST00000558400 ANKRD20A5PA0PJZ0 165 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 HMX3A6NHT5 357 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 TEX22C9J3V5 150 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 CTSDP07339 412 aaPredicted RBP6.54□□□□□ -1.36
TPM1-213ENST00000558400 APELAP0DMC3 54 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 CTRB1P17538 263 aa6.54□□□□□ -1.36
TPM1-213ENST00000558400 FAUP35544 74 aaKnown RBP6.54□□□□□ -1.36
TPM1-213ENST00000558400 G6PCP35575 357 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms