RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 PMP22Q01453 160 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 TBR1Q16650 682 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 MYO7BQ6PIF6 2116 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 PCSK4Q6UW60 755 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 OR51H1Q8NH63 302 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 DKK4Q9UBT3 224 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 IGKV1-6A0A0C4DH72 117 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 KLRC4-KLRK1H3BQV0 150 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 TGFBR3Q03167 851 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 BATF2Q8N1L9 274 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 TMEM251Q8N6I4 163 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 TMEM178AQ8NBL3 297 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 OR4S2Q8NH73 311 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 TSKUQ8WUA8 353 aa9.1□□□□□ -0.95
USP3-206ENST00000558157 LAMA5O15230 3695 aa9.09□□□□□ -0.95
USP3-206ENST00000558157 PMS2P5A8MQ11 134 aa9.09□□□□□ -0.95
USP3-206ENST00000558157 C1orf185Q5T7R7 199 aa9.09□□□□□ -0.95
USP3-206ENST00000558157 TMEM136Q6ZRR5 245 aa9.09□□□□□ -0.95
USP3-206ENST00000558157 ZNF439Q8NDP4 499 aa9.09□□□□□ -0.95
USP3-206ENST00000558157 C11orf52Q96A22 123 aa9.09□□□□□ -0.95
USP3-206ENST00000558157 CLEC7AQ9BXN2 247 aa9.09□□□□□ -0.95
USP3-206ENST00000558157 MEGF9Q9H1U4 602 aa9.09□□□□□ -0.95
USP3-206ENST00000558157 C1RLQ9NZP8 487 aa9.09□□□□□ -0.95
USP3-206ENST00000558157 KIAA1549Q9HCM3 1950 aa9.09□□□□□ -0.95
USP3-206ENST00000558157 PGPEP1LA6NFU8 196 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 M0R1X1 148 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 CD5LO43866 347 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 MPDU1O75352 247 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 EGR1P18146 543 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 REG1BP48304 166 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 FGF12P61328 243 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 IZUMO4Q1ZYL8 232 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 FAM27BQ5VT28 67 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 LINC00596Q86U02 117 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 ZNF611Q8N823 705 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 OR8B3Q8NGG8 313 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 OR8B2Q96RD0 313 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 HES4Q9HCC6 221 aa9.09□□□□□ -0.96
USP3-206ENST00000558157 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.96
USP3-206ENST00000558157 A0A0J9YW62 118 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 ZNF816-ZNF321PA0A0X1KG74 233 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 A0A1W2PPV4 95 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 DHHO43323 396 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 CXorf1O96002 111 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 HLA-DRB1P01911 266 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 SCGB1A1P11684 91 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 IGLL1P15814 213 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 PLCXD3Q63HM9 321 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 RASL11AQ6T310 242 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 GGNQ86UU5 652 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 ST6GALNAC3Q8NDV1 305 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 OR1K1Q8NGR3 316 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 ABHD3Q8WU67 409 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 RCHY1Q96PM5 261 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 RAXQ9Y2V3 346 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 V9GYV3 84 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 ACACAQ13085 2346 aa9.08□□□□□ -0.96
USP3-206ENST00000558157 TRGV10A0A0A0MS01 117 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 AMY1AP04745 511 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 PLA2G5P39877 138 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 RNFT1Q5M7Z0 435 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 BVES-AS1Q5T3Y7 98 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 ZDHHC23Q8IYP9 409 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 OR2AE1Q8NHA4 323 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 NINJ1Q92982 152 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 SH3BGRL2Q9UJC5 107 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 DMXL2Q8TDJ6 3036 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 IGHV3-15A0A0B4J1V0 119 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 TRAV17A0A0B4J275 112 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 hCG_38984A0A1B0GV85 526 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 GJE1A6NN92 205 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.07□□□□□ -0.96
USP3-206ENST00000558157 K7ENP7 123 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 SYNGR3O43761 229 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 S100A7P31151 101 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 PAX2Q02962 417 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 PDCD1Q15116 288 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 KRTAP27-1Q3LI81 207 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 ZNF585BQ52M93 769 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 AMMECR1LQ6DCA0 310 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 INO80CQ6PI98 192 aaPredicted RBP9.07□□□□□ -0.96
USP3-206ENST00000558157 OR1L1Q8NH94 360 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 SRXN1Q9BYN0 137 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 ARL2-SNX15V9GYD0 113 aa9.07□□□□□ -0.96
USP3-206ENST00000558157 G3V4G9 280 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 BMPR1BO00238 502 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 SLC17A3O00476 420 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 VAMP5O95183 116 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 STAG3L2P0CL84 134 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 STAG3L3P0CL85 134 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 SRIP30626 198 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 UBE2G1P62253 170 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 TFF3Q07654 80 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 PSG7Q13046 419 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 MPV17L2Q567V2 206 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 FAM162BQ5T6X4 162 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 OR8I2Q8N0Y5 310 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 ZADH2Q8N4Q0 377 aa9.06□□□□□ -0.96
USP3-206ENST00000558157 OR1F12Q8NHA8 337 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms