RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ANKRD20A5PA0PJZ0 165 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 ANKRD34BA5PLL1 514 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 LINC01619G3V211 115 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 UPK2O00526 184 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 CYB5BO43169 146 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 DUS4LO95620 317 aaKnown RBP6.99□□□□□ -1.29
SPG11-207ENST00000558138 PRH1P02810 166 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 REG1AP05451 166 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 LGALS1P09382 135 aaKnown RBP6.99□□□□□ -1.29
SPG11-207ENST00000558138 BRWD1-AS2P59051 145 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 OR2B8PP59922 312 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 ZNF616Q08AN1 781 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 OXLD1Q5BKU9 147 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 ETV3LQ6ZN32 361 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 LINC00482Q8N8I6 264 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 RNF152Q8N8N0 203 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 MRGPRFQ96AM1 343 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 TSC22D3Q99576 134 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 PDCD10Q9BUL8 212 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 NSG2Q9Y328 171 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 TRRAPQ9Y4A5 3859 aa6.99□□□□□ -1.29
SPG11-207ENST00000558138 WNK1Q9H4A3 2382 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 TRAV3A0A0B4J244 114 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 LINC00854A0A1B0GVQ3 168 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 H0Y980 276 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 OR2J3O76001 311 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 CTSDP07339 412 aaPredicted RBP6.98□□□□□ -1.29
SPG11-207ENST00000558138 MYOD1P15172 320 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 PTBP1P26599 531 aaKnown RBP eCLIP6.98□□□□□ -1.29
SPG11-207ENST00000558138 RND3P61587 244 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 SSBP2P81877 361 aaPredicted RBP6.98□□□□□ -1.29
SPG11-207ENST00000558138 ATP5G2Q06055 141 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 SP6Q3SY56 376 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 C19orf54Q5BKX5 351 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 ASPHD1Q5U4P2 390 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 TMED4Q7Z7H5 227 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 CCDC190Q86UF4 302 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 LHFPL1Q86WI0 220 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 SGPP2Q8IWX5 399 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 ADAD2Q8NCV1 583 aaKnown RBP6.98□□□□□ -1.29
SPG11-207ENST00000558138 OR6Q1Q8NGQ2 317 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 RRNAD1Q96FB5 475 aaKnown RBP6.98□□□□□ -1.29
SPG11-207ENST00000558138 QTRT1Q9BXR0 403 aaKnown RBP6.98□□□□□ -1.29
SPG11-207ENST00000558138 FKBP11Q9NYL4 201 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 PRNDQ9UKY0 176 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 ZNF257Q9Y2Q1 563 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 OR51B2Q9Y5P1 312 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 V9GYH0 126 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 FBN3Q75N90 2809 aa6.98□□□□□ -1.29
SPG11-207ENST00000558138 IGHV4OR15-8A0A075B7B6 117 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 A0A087WW49 117 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 FAM223BA6NKX1 122 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 SEC14L6B5MCN3 397 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 HSPB1P04792 205 aaKnown RBP6.97□□□□□ -1.29
SPG11-207ENST00000558138 OR5AC1P0C628 307 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 ZNF735P0CB33 412 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 TRAPPC2P0DI81 140 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 TRAPPC2BP0DI82 140 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 AREGP15514 252 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 AKR1C4P17516 323 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 SLURP1P55000 103 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 RHOGP84095 191 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 EXOSC2Q13868 293 aaKnown RBP6.97□□□□□ -1.29
SPG11-207ENST00000558138 SURF2Q15527 256 aaPredicted RBP6.97□□□□□ -1.29
SPG11-207ENST00000558138 POU2AF1Q16633 256 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 MRGPRG-AS1Q2M3A8 158 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 ZNF585BQ52M93 769 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 SAMD5Q5TGI4 173 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 FAM223AQ8IWN6 122 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 TTC9CQ8N5M4 171 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 OR1L8Q8NGR8 309 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 MYOZ3Q8TDC0 251 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 LSM10Q969L4 123 aaKnown RBP6.97□□□□□ -1.29
SPG11-207ENST00000558138 USMG5Q96IX5 58 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 TMEM56Q96MV1 263 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 TP53RKQ96S44 253 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 P2RX4Q99571 388 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 NAA60Q9H7X0 242 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 RANGRFQ9HD47 186 aaPredicted RBP6.97□□□□□ -1.29
SPG11-207ENST00000558138 ENY2Q9NPA8 101 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 FAM212BQ9NTI7 297 aaPredicted RBP6.97□□□□□ -1.29
SPG11-207ENST00000558138 FBXL7Q9UJT9 491 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 KCNIP3Q9Y2W7 256 aa6.97□□□□□ -1.29
SPG11-207ENST00000558138 NPIPB5A8MRT5 1133 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 CENPXA8MT69 81 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 TEX22C9J3V5 150 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 I3L521 148 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 OVOL1O14753 267 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 SAP30O75446 220 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 B3GALNT1O75752 331 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 IFNA17P01571 189 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 PRB2P02812 416 aaPredicted RBP6.96□□□□□ -1.3
SPG11-207ENST00000558138 IL6RP08887 468 aaPredicted RBP6.96□□□□□ -1.3
SPG11-207ENST00000558138 OR13C7P0DN81 318 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 ANXA3P12429 323 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 HIST1H1BP16401 226 aaKnown RBP6.96□□□□□ -1.3
SPG11-207ENST00000558138 ZP3P21754 424 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 PSMB6P28072 239 aa6.96□□□□□ -1.3
SPG11-207ENST00000558138 HOXD3P31249 432 aaPredicted RBP6.96□□□□□ -1.3
SPG11-207ENST00000558138 RUNX1Q01196 453 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms