RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 SLC25A45Q8N413 288 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 ZDHHC22Q8N966 263 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 GDPD1Q8N9F7 314 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF555Q8NEP9 628 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 OR11H6Q8NGC7 330 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 OR5H2Q8NGV7 314 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF675Q8TD23 568 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 CT55Q8WUE5 264 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 MBD3L1Q8WWY6 194 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 GPR146Q96CH1 333 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 YPEL4Q96NS1 127 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 GPR82Q96P67 336 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 OR7D2Q96RA2 312 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 RNF5Q99942 180 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 C1orf50Q9BV19 199 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 MND1Q9BWT6 205 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 GNB1LQ9BYB4 327 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 TMEM126AQ9H061 195 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 VCXQ9H320 206 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 MED29Q9NX70 200 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 TMEM216Q9P0N5 145 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 BTRCQ9Y297 605 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 CCDC141Q6ZP82 1450 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 KMT2EQ8IZD2 1858 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 KIAA1107Q9UPP5 1409 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 LRP5O75197 1615 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 PHRF1Q9P1Y6 1649 aaKnown RBP1.98□□□□□ -2.09
TRAV28-201ENST00000557548 CASZ1Q86V15 1759 aa1.98□□□□□ -2.09
TRAV28-201ENST00000557548 DHX57Q6P158 1386 aaKnown RBP1.98□□□□□ -2.09
TRAV28-201ENST00000557548 RGPD1P0DJD0 1748 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 ARHGEF28Q8N1W1 1705 aaKnown RBP1.97□□□□□ -2.09
TRAV28-201ENST00000557548 NEXMIFQ5QGS0 1516 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 LMTK2Q8IWU2 1503 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 PTPRJQ12913 1337 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 LRRC9Q6ZRR7 1453 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 NLRP1Q9C000 1473 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 ITGB4P16144 1822 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 TRAV8-1A0A0A6YYK1 113 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 IGHV2-26A0A0B4J1V2 119 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 CCDC160A6NGH7 325 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 CD300LBA8K4G0 201 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 A8MU10 97 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 A8MWL6 223 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 C9JQL5 133 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 J3KT08 172 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 TXNDC9O14530 226 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 FAM107AO95990 144 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 CXorf1O96002 111 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 IFNGP01579 166 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 IGHMP01871 453 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 C1QBP02746 253 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 C1QCP02747 245 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 SERPINE1P05121 402 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 SOD3P08294 240 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 HTR1AP08908 422 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 DNAH10OSP0CZ25 163 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 SCGB1C2P0DMR2 95 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 OR12D1P0DN82 309 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 FGF6P10767 208 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 CTLA4P16410 223 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 IMPA1P29218 277 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 HSPA9P38646 679 aaKnown RBP1.97□□□□□ -2.09
TRAV28-201ENST00000557548 EMP1P54849 157 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 CTBP2P56545 445 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 NCALDP61601 193 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 SNRPD2P62316 118 aaKnown RBP1.97□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF616Q08AN1 781 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 LCE3AQ5TA76 89 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 FAM222AQ5U5X8 452 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 GLYATQ6IB77 296 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 LCN8Q6JVE9 175 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 MORN3Q6PF18 240 aaPredicted RBP1.97□□□□□ -2.09
TRAV28-201ENST00000557548 AGTRAPQ6RW13 159 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 CLEC20AQ6ZU45 233 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 VN1R4Q7Z5H5 301 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 MARCH3Q86UD3 253 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF695Q8IW36 515 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 UMODL1-AS1Q8N2C9 162 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 Q8N7P7 452 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 ZIC4Q8N9L1 334 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 OR8B12Q8NGG6 310 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 OR51H1Q8NH63 302 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 UBALD1Q8TB05 177 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 SCGB1C1Q8TD33 95 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 CANT1Q8WVQ1 401 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 GALMQ96C23 342 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 MALSU1Q96EH3 234 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 OR52B2Q96RD2 323 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 SERPINI1Q99574 410 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 PRSS27Q9BQR3 290 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 DOHHQ9BU89 302 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 TMEM147Q9BVK8 224 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 GGACTQ9BVM4 153 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 CHST6Q9GZX3 395 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 CALML5Q9NZT1 146 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 TAC3Q9UHF0 121 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 POMPQ9Y244 141 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 FIS1Q9Y3D6 152 aa1.97□□□□□ -2.09
TRAV28-201ENST00000557548 RBM7Q9Y580 266 aaKnown RBP1.97□□□□□ -2.09
TRAV28-201ENST00000557548 RTEL1-TNFRSF6BF6WH68 1400 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms