RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 CASTOR1Q8WTX7 329 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 C7orf50Q9BRJ6 194 aaKnown RBP10.73□□□□□ -0.69
VPS33B-206ENST00000557358 PLEKHA2Q9HB19 425 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 RANGRFQ9HD47 186 aaPredicted RBP10.73□□□□□ -0.69
VPS33B-206ENST00000557358 BET1LQ9NYM9 111 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 COMMD9Q9P000 198 aa10.73□□□□□ -0.69
VPS33B-206ENST00000557358 MEGF8Q7Z7M0 2845 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 LINC00854A0A1B0GVQ3 168 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 M0QYG6 137 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 OVOL1O14753 267 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 CYB5BO43169 146 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 BRI3O95415 125 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 RLN1P04808 185 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 PGAM2P15259 253 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 F2RP25116 425 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 GNRHRP30968 328 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 DEFA1P59665 94 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 DEFA3P59666 94 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 KIAA0141Q14154 515 aaPredicted RBP10.72□□□□□ -0.69
VPS33B-206ENST00000557358 MEF2DQ14814 521 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 TATDN3Q17R31 274 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 VAX1Q5SQQ9 334 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 VKORC1L1Q8N0U8 176 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 OR4C16Q8NGL9 310 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 FYTTD1Q96QD9 318 aaKnown RBP10.72□□□□□ -0.69
VPS33B-206ENST00000557358 TINAGL1Q9GZM7 467 aaPredicted RBP10.72□□□□□ -0.69
VPS33B-206ENST00000557358 COMMD5Q9GZQ3 224 aa10.72□□□□□ -0.69
VPS33B-206ENST00000557358 NAP1L6A6NFF2 107 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 FAM223BA6NKX1 122 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 CENPXA8MT69 81 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 DISC1C4P0D8 188 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 LYRM1O43325 122 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 PGLYRP1O75594 196 aaPredicted RBP10.71□□□□□ -0.69
VPS33B-206ENST00000557358 SNAPC5O75971 98 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 PRB2P02812 416 aaPredicted RBP10.71□□□□□ -0.69
VPS33B-206ENST00000557358 APELAP0DMC3 54 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 HLA-GP17693 338 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 ASAH1Q13510 395 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 FAAP20Q6NZ36 180 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 FAM223AQ8IWN6 122 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 PUSL1Q8N0Z8 303 aaKnown RBP10.71□□□□□ -0.69
VPS33B-206ENST00000557358 ARRDC1Q8N5I2 433 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 OR4D10Q8NGI6 311 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 GPHA2Q96T91 129 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 ELOVL1Q9BW60 279 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 AURKAIP1Q9NWT8 199 aaPredicted RBP10.71□□□□□ -0.69
VPS33B-206ENST00000557358 TBC1D24Q9ULP9 559 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 ZNF257Q9Y2Q1 563 aa10.71□□□□□ -0.69
VPS33B-206ENST00000557358 PLA2G10O15496 165 aa10.7□□□□□ -0.7
VPS33B-206ENST00000557358 DEFA4P12838 97 aa10.7□□□□□ -0.7
VPS33B-206ENST00000557358 HOXD3P31249 432 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-206ENST00000557358 UCP3P55916 312 aa10.7□□□□□ -0.7
VPS33B-206ENST00000557358 ATP5G2Q06055 141 aa10.7□□□□□ -0.7
VPS33B-206ENST00000557358 PHLDA2Q53GA4 152 aa10.7□□□□□ -0.7
VPS33B-206ENST00000557358 THOC7Q6I9Y2 204 aaKnown RBP10.7□□□□□ -0.7
VPS33B-206ENST00000557358 OR4A47Q6IF82 309 aa10.7□□□□□ -0.7
VPS33B-206ENST00000557358 ZNF429Q86V71 674 aa10.7□□□□□ -0.7
VPS33B-206ENST00000557358 TTC9CQ8N5M4 171 aa10.7□□□□□ -0.7
VPS33B-206ENST00000557358 ADAD2Q8NCV1 583 aaKnown RBP10.7□□□□□ -0.7
VPS33B-206ENST00000557358 DCUN1D4Q92564 292 aa10.7□□□□□ -0.7
VPS33B-206ENST00000557358 FAM212BQ9NTI7 297 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-206ENST00000557358 MCUBQ9NWR8 336 aa10.7□□□□□ -0.7
VPS33B-206ENST00000557358 ATG12O94817 140 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 S1PR2O95136 353 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 SERPINE2P07093 398 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 FGF2P09038 288 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 HIST1H1BP16401 226 aaKnown RBP10.69□□□□□ -0.7
VPS33B-206ENST00000557358 ECI1P42126 302 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 SSBP2P81877 361 aaPredicted RBP10.69□□□□□ -0.7
VPS33B-206ENST00000557358 RHOGP84095 191 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 EGFEM1PQ0D2K5 195 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 POU2AF1Q16633 256 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 MZT2BQ6NZ67 158 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 CCDC71LQ8N9Z2 235 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 NECAP1Q8NC96 275 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 ZFAND1Q8TCF1 268 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 ZNF486Q96H40 463 aaPredicted RBP10.69□□□□□ -0.7
VPS33B-206ENST00000557358 OR4C12Q96R67 309 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 PRRT1Q99946 306 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 FXYD6Q9H0Q3 95 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 ALX4Q9H161 411 aaPredicted RBP10.69□□□□□ -0.7
VPS33B-206ENST00000557358 SLC2A9Q9NRM0 540 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 TMEM140Q9NV12 185 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 FKBP11Q9NYL4 201 aa10.69□□□□□ -0.7
VPS33B-206ENST00000557358 IGHV4OR15-8A0A075B7B6 117 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 A0A087WW49 117 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 ANKRD34BA5PLL1 514 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 MARCH11A6NNE9 402 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 NPIPB5A8MRT5 1133 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 SAP30O75446 220 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 ZNF735P0CB33 412 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 LPAR6P43657 344 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 SLURP1P55000 103 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 RPEL1Q2QD12 228 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 SCGB2B2Q4G0G5 96 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 DEFB121Q5J5C9 76 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 C10orf55Q5SWW7 151 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 ASPHD1Q5U4P2 390 aa10.68□□□□□ -0.7
VPS33B-206ENST00000557358 HSD17B13Q7Z5P4 300 aaPredicted RBP10.68□□□□□ -0.7
VPS33B-206ENST00000557358 SRSF8Q9BRL6 282 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms