RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 C8orf44Q96CB5 159 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 WDYHV1Q96HA8 205 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 RBM38Q9H0Z9 239 aaKnown RBP7.62□□□□□ -1.19
SYNE3-205ENST00000557275 PPIAL4AQ9Y536 164 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 IGKV3-7A0A075B6H7 116 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 H3BUT2 72 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 SPINT1O43278 529 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 DXOO77932 396 aaKnown RBP7.62□□□□□ -1.19
SYNE3-205ENST00000557275 C2orf68Q2NKX9 166 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 ST6GALNAC2Q9UJ37 374 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 RPP21Q9H633 154 aaKnown RBP7.62□□□□□ -1.19
SYNE3-205ENST00000557275 TMEM202A6NGA9 273 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 IL11P20809 199 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 WDR54Q9H977 334 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 CYP2G1PQ6ZSU1 146 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 GSN-AS1Q9NRJ2 163 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 TRBV20-1A0A075B6N2 111 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 A0A1W2PRS3 328 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 PCSK4Q6UW60 755 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 LURAP1LQ8IV03 231 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 FXYD1O00168 92 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 LIPT2A6NK58 231 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 ITGB1BP1O14713 200 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 IGHV4-39P01824 125 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 APOHP02749 345 aaPredicted RBP7.62□□□□□ -1.19
SYNE3-205ENST00000557275 COX5BP10606 129 aa7.62□□□□□ -1.19
SYNE3-205ENST00000557275 ZNF124Q15973 351 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 PDFQ9HBH1 243 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 MED19A0JLT2 244 aaPredicted RBP7.61□□□□□ -1.19
SYNE3-205ENST00000557275 LEPROTO15243 131 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 IL6RP08887 468 aaPredicted RBP7.61□□□□□ -1.19
SYNE3-205ENST00000557275 ARPC1AQ92747 370 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 IZUMO1RA6ND01 250 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 C16orf97H3BN30 126 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 RPS27P42677 84 aaKnown RBP7.61□□□□□ -1.19
SYNE3-205ENST00000557275 CHTOPQ9Y3Y2 248 aaKnown RBP7.61□□□□□ -1.19
SYNE3-205ENST00000557275 PLPPR2Q96GM1 343 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 TDGF1P3P51864 188 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.61□□□□□ -1.19
SYNE3-205ENST00000557275 TMEM252Q8N6L7 170 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 RNASEH2CQ8TDP1 164 aaKnown RBP7.61□□□□□ -1.19
SYNE3-205ENST00000557275 WBP1LQ9NX94 342 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 KLK10O43240 276 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 P2RY4P51582 365 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 WTIPA6NIX2 430 aaPredicted RBP7.61□□□□□ -1.19
SYNE3-205ENST00000557275 PF4P02776 101 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 LAMTOR3Q9UHA4 124 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 OR10W1Q8NGF6 305 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 VSTM2LQ96N03 204 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 KLF4O43474 513 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 IGLV3-27P01718 113 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 C1QTNF9P0C862 333 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 CMC4P56277 68 aaPredicted RBP7.61□□□□□ -1.19
SYNE3-205ENST00000557275 CD8AP01732 235 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 MPV17P39210 176 aa7.61□□□□□ -1.19
SYNE3-205ENST00000557275 NHP2Q9NX24 153 aaKnown RBP7.61□□□□□ -1.19
SYNE3-205ENST00000557275 C9orf153Q5TBE3 101 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 NPIPB11E5RHQ5 1161 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 K7ESM1 405 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 ZNF250P15622 560 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 WDR82Q6UXN9 313 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 SLC50A1Q9BRV3 221 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 NCOA6Q14686 2063 aaPredicted RBP7.6□□□□□ -1.19
SYNE3-205ENST00000557275 SCN10AQ9Y5Y9 1956 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 SRD5A1P18405 259 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 AURKAIP1Q9NWT8 199 aaPredicted RBP7.6□□□□□ -1.19
SYNE3-205ENST00000557275 SCN7AQ01118 1682 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 TRAV12-3A0A0B4J271 114 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 SPTY2D1-AS1A0A0U1RR47 76 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 SSTR5P35346 364 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 CCSMST1Q4G0I0 132 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 NHLRC3Q5JS37 347 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 GDF15Q99988 308 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 TMEM242Q9NWH2 141 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 GPR146Q96CH1 333 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 SEPSECSQ9HD40 501 aaKnown RBP7.6□□□□□ -1.19
SYNE3-205ENST00000557275 CBLN1P23435 193 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 FAM27BQ5VT28 67 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 TOMM7Q9P0U1 55 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 TM4SF5O14894 197 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 AQP3Q92482 292 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 PLEKHB2Q96CS7 222 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 PKIGQ9Y2B9 76 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 STRCP1A6NGW2 1772 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 FER1L6-AS1Q8NA97 138 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 ADAD2Q8NCV1 583 aaKnown RBP7.6□□□□□ -1.19
SYNE3-205ENST00000557275 PEMTQ9UBM1 199 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 JPT1Q9UK76 154 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 LEPP41159 167 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 C14orf144Q96I85 54 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 NOTCH2Q04721 2471 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 TRAV2A0A0B4J234 112 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 WFDC3Q8IUB2 231 aa7.6□□□□□ -1.19
SYNE3-205ENST00000557275 PRSS23O95084 383 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 NEGR1Q7Z3B1 354 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 ZNF660Q6AZW8 331 aaPredicted RBP7.59□□□□□ -1.19
SYNE3-205ENST00000557275 MAFAQ8NHW3 353 aaPredicted RBP7.59□□□□□ -1.19
SYNE3-205ENST00000557275 COQ2Q96H96 371 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 CLEC7AQ9BXN2 247 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 SIRT4Q9Y6E7 314 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms