RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 TRAV3A0A0B4J244 114 aa17.66■□□□□ 0.42
TDP1-216ENST00000556867 C13orf42A0A1B0GVH6 325 aa17.66■□□□□ 0.42
TDP1-216ENST00000556867 HMX3A6NHT5 357 aa17.66■□□□□ 0.42
TDP1-216ENST00000556867 LINC01619G3V211 115 aa17.66■□□□□ 0.42
TDP1-216ENST00000556867 PPP5CP53041 499 aa17.66■□□□□ 0.42
TDP1-216ENST00000556867 REC114Q7Z4M0 266 aa17.66■□□□□ 0.42
TDP1-216ENST00000556867 USMG5Q96IX5 58 aa17.66■□□□□ 0.42
TDP1-216ENST00000556867 FYTTD1Q96QD9 318 aaKnown RBP17.66■□□□□ 0.42
TDP1-216ENST00000556867 IGHV4OR15-8A0A075B7B6 117 aa17.65■□□□□ 0.42
TDP1-216ENST00000556867 A0A087WW49 117 aa17.65■□□□□ 0.42
TDP1-216ENST00000556867 AKAIN1P0CW23 69 aa17.65■□□□□ 0.42
TDP1-216ENST00000556867 MYOD1P15172 320 aa17.65■□□□□ 0.42
TDP1-216ENST00000556867 PTBP1P26599 531 aaKnown RBP eCLIP17.65■□□□□ 0.42
TDP1-216ENST00000556867 SCGB2B2Q4G0G5 96 aa17.65■□□□□ 0.42
TDP1-216ENST00000556867 OR4C16Q8NGL9 310 aa17.65■□□□□ 0.42
TDP1-216ENST00000556867 ZNF257Q9Y2Q1 563 aa17.65■□□□□ 0.42
TDP1-216ENST00000556867 TRBV9A0A0B4J1U6 114 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 ANKRD20A5PA0PJZ0 165 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 CGB1A6NKQ9 187 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 NPIPB5A8MRT5 1133 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 HSPB1P04792 205 aaKnown RBP17.64■□□□□ 0.41
TDP1-216ENST00000556867 RPA2P15927 270 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 PI3P19957 117 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 S100A5P33763 92 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 OR2B8PP59922 312 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 EGFEM1PQ0D2K5 195 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 FAAP20Q6NZ36 180 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 ZFAND1Q8TCF1 268 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 MRGPRFQ96AM1 343 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 V9GYH0 126 aa17.64■□□□□ 0.41
TDP1-216ENST00000556867 FAM223BA6NKX1 122 aa17.63■□□□□ 0.41
TDP1-216ENST00000556867 DISC1C4P0D8 188 aa17.63■□□□□ 0.41
TDP1-216ENST00000556867 RBMXL2O75526 392 aaKnown RBP17.63■□□□□ 0.41
TDP1-216ENST00000556867 KRASP01116 189 aa17.63■□□□□ 0.41
TDP1-216ENST00000556867 PRB2P02812 416 aaPredicted RBP17.63■□□□□ 0.41
TDP1-216ENST00000556867 G6PCP35575 357 aa17.63■□□□□ 0.41
TDP1-216ENST00000556867 PIGPP57054 158 aa17.63■□□□□ 0.41
TDP1-216ENST00000556867 DEFA5Q01523 94 aa17.63■□□□□ 0.41
TDP1-216ENST00000556867 ZNF45Q02386 682 aa17.63■□□□□ 0.41
TDP1-216ENST00000556867 FAM223AQ8IWN6 122 aa17.63■□□□□ 0.41
TDP1-216ENST00000556867 OR13C8Q8NGS7 320 aa17.63■□□□□ 0.41
TDP1-216ENST00000556867 COMMD5Q9GZQ3 224 aa17.63■□□□□ 0.41
TDP1-216ENST00000556867 DPPA5A6NC42 116 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 PRH1P02810 166 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 CRYGCP07315 174 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 AREGP15514 252 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 HOXD3P31249 432 aaPredicted RBP17.62■□□□□ 0.41
TDP1-216ENST00000556867 ECI1P42126 302 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 SLURP1P55000 103 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 RHOGP84095 191 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 C9orf66Q5T8R8 295 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 ZNF343Q6P1L6 599 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 CCDC190Q86UF4 302 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 MARCH1Q8TCQ1 289 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 DCUN1D4Q92564 292 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 SRSF8Q9BRL6 282 aaKnown RBP17.62■□□□□ 0.41
TDP1-216ENST00000556867 AKIP1Q9NQ31 210 aa17.62■□□□□ 0.41
TDP1-216ENST00000556867 AURKAIP1Q9NWT8 199 aaPredicted RBP17.62■□□□□ 0.41
TDP1-216ENST00000556867 SEC14L6B5MCN3 397 aa17.61■□□□□ 0.41
TDP1-216ENST00000556867 H0Y980 276 aa17.61■□□□□ 0.41
TDP1-216ENST00000556867 CTSDP07339 412 aaPredicted RBP17.61■□□□□ 0.41
TDP1-216ENST00000556867 PSMB6P28072 239 aa17.61■□□□□ 0.41
TDP1-216ENST00000556867 SURF2Q15527 256 aaPredicted RBP17.61■□□□□ 0.41
TDP1-216ENST00000556867 CCDC71LQ8N9Z2 235 aa17.61■□□□□ 0.41
TDP1-216ENST00000556867 NECAP1Q8NC96 275 aa17.61■□□□□ 0.41
TDP1-216ENST00000556867 DLX4Q92988 240 aaPredicted RBP17.61■□□□□ 0.41
TDP1-216ENST00000556867 SEC22AQ96IW7 307 aa17.61■□□□□ 0.41
TDP1-216ENST00000556867 PRRT1Q99946 306 aa17.61■□□□□ 0.41
TDP1-216ENST00000556867 QTRT1Q9BXR0 403 aaKnown RBP17.61■□□□□ 0.41
TDP1-216ENST00000556867 RANGRFQ9HD47 186 aaPredicted RBP17.61■□□□□ 0.41
TDP1-216ENST00000556867 IGLC7A0M8Q6 106 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 OVOL1O14753 267 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 IGKV1-39P01597 117 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 IGKV1D-39P04432 117 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 SERPINE2P07093 398 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 CTRB1P17538 263 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 KRTAP10-11P60412 298 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 ZNF79Q15937 498 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 KLK9Q2XQG4 91 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 CTRB2Q6GPI1 263 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 THOC7Q6I9Y2 204 aaKnown RBP17.6■□□□□ 0.41
TDP1-216ENST00000556867 TRIM63Q969Q1 353 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 TSC22D3Q99576 134 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 THAP7Q9BT49 309 aaPredicted RBP17.6■□□□□ 0.41
TDP1-216ENST00000556867 SLC2A8Q9NY64 477 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 NDUFA13Q9P0J0 144 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 COPZ2Q9P299 210 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 KLK9Q9UKQ9 250 aa17.6■□□□□ 0.41
TDP1-216ENST00000556867 SNAPC5O75971 98 aa17.59■□□□□ 0.41
TDP1-216ENST00000556867 ZP3P21754 424 aa17.59■□□□□ 0.41
TDP1-216ENST00000556867 PYDC2Q56P42 97 aa17.59■□□□□ 0.41
TDP1-216ENST00000556867 C19orf35Q6ZS72 473 aa17.59■□□□□ 0.41
TDP1-216ENST00000556867 OR1L8Q8NGR8 309 aa17.59■□□□□ 0.41
TDP1-216ENST00000556867 TP53RKQ96S44 253 aa17.59■□□□□ 0.41
TDP1-216ENST00000556867 PRNDQ9UKY0 176 aa17.59■□□□□ 0.41
TDP1-216ENST00000556867 C3orf85A0A1B0GTC6 90 aa17.58■□□□□ 0.4
TDP1-216ENST00000556867 TEX50A0A1B0GTY4 177 aa17.58■□□□□ 0.4
TDP1-216ENST00000556867 ANKRD34BA5PLL1 514 aa17.58■□□□□ 0.4
TDP1-216ENST00000556867 DHFRP00374 187 aa17.58■□□□□ 0.4
TDP1-216ENST00000556867 ETV6P41212 452 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms