RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 MAS1LP35410 378 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 G6PCP35575 357 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 ECI1P42126 302 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 EXOSC2Q13868 293 aaKnown RBP7.97□□□□□ -1.13
SNX6-208ENST00000556712 LHFPL1Q86WI0 220 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 TTC9CQ8N5M4 171 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 OR4A5Q8NH83 315 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 MCFD2Q8NI22 146 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 SMIM4Q8WVI0 70 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 DGCR14Q96DF8 476 aaKnown RBP7.97□□□□□ -1.13
SNX6-208ENST00000556712 DIRAS2Q96HU8 199 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 PLEKHA2Q9HB19 425 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 NSG2Q9Y328 171 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 S4R3C0 116 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 TRBV9A0A0B4J1U6 114 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 DPPA5A6NC42 116 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 NPIPB5A8MRT5 1133 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 BRI3O95415 125 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 RAB3DO95716 219 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 KRASP01116 189 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 IGHV3-23P01764 117 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 IFNA6P05013 189 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 PSMB6P28072 239 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 UCP3P55916 312 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 TAS2R19P59542 299 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 OR2B8PP59922 312 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 ERVK-16P61578 105 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 SCGB2B2Q4G0G5 96 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 ZNF343Q6P1L6 599 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 SLC38A6Q8IZM9 456 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 TMEM229BQ8NBD8 167 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 OR10W1Q8NGF6 305 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 CD300LFQ8TDQ1 290 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 RBM38Q9H0Z9 239 aaKnown RBP7.96□□□□□ -1.14
SNX6-208ENST00000556712 RANGRFQ9HD47 186 aaPredicted RBP7.96□□□□□ -1.14
SNX6-208ENST00000556712 SLC2A9Q9NRM0 540 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 PEF1Q9UBV8 284 aaKnown RBP7.96□□□□□ -1.14
SNX6-208ENST00000556712 ZNF257Q9Y2Q1 563 aa7.96□□□□□ -1.14
SNX6-208ENST00000556712 IGLC7A0M8Q6 106 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 FAM223BA6NKX1 122 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 TPPPO94811 219 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 NDUFB8O95169 186 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 LY86O95711 162 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 IGKV1-39P01597 117 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 CD74P04233 296 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 IGKV1D-39P04432 117 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 CTRB1P17538 263 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 TBPP20226 339 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 PIGPP57054 158 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 SYNJ2BPP57105 145 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 ATP5G2Q06055 141 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 C15orf32Q32M92 178 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 DEFB121Q5J5C9 76 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 CTRB2Q6GPI1 263 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 STEAP1BQ6NZ63 245 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 LPCAT3Q6P1A2 487 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 ACSM6Q6P461 480 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 SLC25A42Q86VD7 318 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 FAM223AQ8IWN6 122 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 ARRDC1Q8N5I2 433 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 OR4C16Q8NGL9 310 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 C15orf40Q8WUR7 153 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 MRGPRFQ96AM1 343 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 USMG5Q96IX5 58 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 FANCD2OSQ96PS1 177 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 AIFM2Q9BRQ8 373 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 COMMD5Q9GZQ3 224 aa7.95□□□□□ -1.14
SNX6-208ENST00000556712 TEX50A0A1B0GTY4 177 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 MFSD2BA6NFX1 497 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 DBX1A6NMT0 343 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 PPP5D1E7EU14 171 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 BMPR1BO00238 502 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 ZP3P21754 424 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 S100GP29377 79 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 TNFSF8P32971 234 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 MRPS10P82664 201 aaKnown RBP7.94□□□□□ -1.14
SNX6-208ENST00000556712 IZUMO4Q1ZYL8 232 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 RPEL1Q2QD12 228 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 NECAP1Q8NC96 275 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 OR13C8Q8NGS7 320 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 MARCH1Q8TCQ1 289 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 CCDC140Q96MF4 163 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 TP53RKQ96S44 253 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 HINT2Q9BX68 163 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 QTRT1Q9BXR0 403 aaKnown RBP7.94□□□□□ -1.14
SNX6-208ENST00000556712 NXF2Q9GZY0 626 aaKnown RBP7.94□□□□□ -1.14
SNX6-208ENST00000556712 RSL24D1Q9UHA3 163 aaKnown RBP7.94□□□□□ -1.14
SNX6-208ENST00000556712 FBXL7Q9UJT9 491 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 ZNF256Q9Y2P7 627 aaPredicted RBP7.94□□□□□ -1.14
SNX6-208ENST00000556712 DMRT1Q9Y5R6 373 aa7.94□□□□□ -1.14
SNX6-208ENST00000556712 IGLV11-55A0A075B6I3 123 aa7.93□□□□□ -1.14
SNX6-208ENST00000556712 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.93□□□□□ -1.14
SNX6-208ENST00000556712 C15orf61A6NNL5 157 aa7.93□□□□□ -1.14
SNX6-208ENST00000556712 H0Y980 276 aa7.93□□□□□ -1.14
SNX6-208ENST00000556712 CTDSPLO15194 276 aa7.93□□□□□ -1.14
SNX6-208ENST00000556712 HLA-AP01891 365 aaKnown RBP7.93□□□□□ -1.14
SNX6-208ENST00000556712 CRYGCP07315 174 aa7.93□□□□□ -1.14
SNX6-208ENST00000556712 TRAPPC2P0DI81 140 aa7.93□□□□□ -1.14
SNX6-208ENST00000556712 TRAPPC2BP0DI82 140 aa7.93□□□□□ -1.14
SNX6-208ENST00000556712 DEFA4P12838 97 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms