RNA–Protein interactions for RNA: ENST00000556401.2

SUB1P2-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 2, humanhuman

BASIC

Gene SUB1P2, Length 297 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P2-201ENST00000556401 C9orf163Q8N9P6 203 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 GPR32P1Q8NGA4 272 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 OPTNQ96CV9 577 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 GNPNAT1Q96EK6 184 aaPredicted RBP0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 ANKRD36BP1Q96IX9 119 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 IMMP2LQ96T52 175 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 TMEM109Q9BVC6 243 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 TTTY13Q9BZ97 58 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 UPF3BQ9BZI7 483 aaKnown RBP0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 OR51I2Q9H344 312 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 MAP1LC3AQ9H492 121 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 XAGE1AQ9HD64 81 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 HRASLSQ9HDD0 168 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 AK3Q9UIJ7 227 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 C3orf18Q9UK00 162 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 ANAPC10Q9UM13 185 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 COQ4Q9Y3A0 265 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 RBM7Q9Y580 266 aaKnown RBP0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 SNURFQ9Y675 71 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 SMARCA4P51532 1647 aa0.33□□□□□ -2.36
SUB1P2-201ENST00000556401 CUL9Q8IWT3 2517 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 IGHV1-69-2A0A0G2JMI3 117 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 OR51F1A6NGY5 319 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 OR4C45A6NMZ5 311 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 COX7A2LO14548 114 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 ACOX3O15254 700 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 SLC16A4O15374 487 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 SSNA1O43805 119 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 ORC5O43913 435 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 DEXIO95424 95 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 C1QAP02745 245 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 TYMSP04818 313 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 REG1AP05451 166 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 LGALS1P09382 135 aaKnown RBP0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 OR5G3P0C626 314 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 OCM2P0CE71 109 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 MYL12AP19105 171 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 RPL12P30050 165 aaKnown RBP0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 MARCKSL1P49006 195 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 CDC34P49427 236 aaPredicted RBP0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 MAGOHP61326 146 aaKnown RBP0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 AKR1C1Q04828 323 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 PPP1R1AQ13522 171 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 CDKL4Q5MAI5 379 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 SYPL2Q5VXT5 272 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 ALKAL1Q6UXT8 129 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 C10orf67Q8IYJ2 551 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 TMEM86AQ8N2M4 240 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 SLC22A24Q8N4F4 322 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 TMEM86BQ8N661 226 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 PACRGLQ8N7B6 248 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 OR2T27Q8NH04 317 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 PIGXQ8TBF5 258 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 ROPN1LQ96C74 230 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 NMNAT3Q96T66 252 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 CHST6Q9GZX3 395 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 USE1Q9NZ43 259 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 RSL24D1Q9UHA3 163 aaKnown RBP0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 DKKL1Q9UK85 242 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 PRELID1Q9Y255 219 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 SCAF11Q99590 1463 aaKnown RBP0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 MED12LQ86YW9 2145 aa0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 DICER1Q9UPY3 1922 aaKnown RBP0.32□□□□□ -2.36
SUB1P2-201ENST00000556401 CPAMD8Q8IZJ3 1885 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 WDR90Q96KV7 1748 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 LRRN3E7EW58 273 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 H0Y980 276 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 M0QZ92 97 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 GEMIN2O14893 280 aaKnown RBP0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 PFDN6O15212 129 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 AHSA1O95433 338 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 NSA2O95478 260 aaKnown RBP0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 APOEP02649 317 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 CLPSP04118 112 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 ISG15P05161 165 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 FAM228BP0C875 321 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 FGF6P10767 208 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 REG1BP48304 166 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 NAA20P61599 178 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 UBE2IP63279 158 aaKnown RBP0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 CAV1Q03135 178 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 OR2F1Q13607 317 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 BATFQ16520 125 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 HIST3H3Q16695 136 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 IMPG1Q17R60 797 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 SAPCD1Q5SSQ6 148 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 CLVS2Q5SYC1 327 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 OGFRL1Q5TC84 451 aaPredicted RBP0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 FAM173BQ6P4H8 233 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 C5orf46Q6UWT4 87 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 SSX8Q7RTT4 187 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 RPP25LQ8N5L8 163 aaKnown RBP0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 OR1M1Q8NGA1 313 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 RAB2BQ8WUD1 216 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 RAB8BQ92930 207 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 PTH2Q96A98 100 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 MRPL57Q9BQC6 102 aaKnown RBP0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 OR8D2Q9GZM6 311 aa0.31□□□□□ -2.36
SUB1P2-201ENST00000556401 PARVGQ9HBI0 331 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms