RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 ST6GALNAC5Q9BVH7 336 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 C1QTNF4Q9BXJ3 329 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 SLC35B3Q9H1N7 401 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 HRH4Q9H3N8 390 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 SPACA1Q9HBV2 294 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 SIRT7Q9NRC8 400 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 OR5AC2Q9NZP5 309 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 METTL1Q9UBP6 276 aaKnown RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 CACFD1Q9UGQ2 172 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 RNF150Q9ULK6 438 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 PIGLQ9Y2B2 252 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 UBE2J1Q9Y385 318 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 MMP24Q9Y5R2 645 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 SOX21Q9Y651 276 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-240ENST00000556339 TMEM56-RWDD3S4R434 201 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 TGP01266 2768 aa3.21□□□□□ -1.9
ATXN3-240ENST00000556339 KIAA2026Q5HYC2 2103 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 TRBV6-6A0A0A6YYG2 114 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 TRAV1-1A0A0B4J248 108 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF816-ZNF321PA0A0X1KG74 233 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 A0A1B0GUS0 222 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 A0A1B0GUV1 79 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 MDFIC2A0A1B0GVS7 189 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 FAM230AA0A1W2PPH8 454 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 C5orf52A6NGY3 159 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 MSGN1A6NI15 193 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 ANKRD30BLA7E2S9 258 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 CD300LBA8K4G0 201 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF850A8MQ14 1090 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 IQCF6A8MYZ5 107 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF732B4DXR9 585 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 H3BSH0 61 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 M0QZ24 198 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 TIMM23O14925 209 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 NUPL2O15504 423 aaKnown RBP3.2□□□□□ -1.9
ATXN3-240ENST00000556339 PDCD6O75340 191 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 ADAP1O75689 374 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 DFFBO76075 338 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 NRASP01111 189 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 IFNA17P01571 189 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 GYPAP02724 150 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 LIPFP07098 398 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 SFTPBP07988 381 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 HOXB5P09067 269 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 OR8U8P0C7N1 319 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 MDKP21741 143 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-240ENST00000556339 S100PP25815 95 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 UCP1P25874 307 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 CHATP28329 748 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 KIR2DS4P43632 304 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 LPAR6P43657 344 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 NPBWR1P48145 328 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 PIGPP57054 158 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 BPIFB3P59826 476 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 S100A10P60903 97 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 HERV-K104P61576 105 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 ARF6P62330 175 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 CLINT1Q14677 625 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 KIR2DS1Q14954 304 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 UBE2V2Q15819 145 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 GUK1Q16774 197 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 MPV17LQ2QL34 196 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 KLF17Q5JT82 389 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-240ENST00000556339 PRAMEF6Q5VXH4 476 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 WDR25Q64LD2 544 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-240ENST00000556339 FIP1L1Q6UN15 594 aaKnown RBP3.2□□□□□ -1.9
ATXN3-240ENST00000556339 LYPD2Q6UXB3 125 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 BRD3OSQ6XYD6 125 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 Q6ZRG5 221 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 C16orf82Q7Z2V1 217 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 OSR2Q8N2R0 312 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 OR13D1Q8NGV5 346 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 RXFP4Q8TDU9 374 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 TAF15Q92804 592 aaKnown RBP eCLIP3.2□□□□□ -1.9
ATXN3-240ENST00000556339 LHX4Q969G2 390 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 ERGIC1Q969X5 290 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 SGK3Q96BR1 496 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 BORCS8Q96FH0 119 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 C12orf57Q99622 126 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 SSX3Q99909 188 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF251Q9BRH9 671 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 PAPOLGQ9BWT3 736 aaKnown RBP3.2□□□□□ -1.9
ATXN3-240ENST00000556339 PARD6GQ9BYG4 376 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-240ENST00000556339 SAV1Q9H4B6 383 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-240ENST00000556339 BANF2Q9H503 90 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 OR2S2Q9NQN1 319 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 C19orf12Q9NSK7 152 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 GSKIPQ9P0R6 139 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 KIAA1456Q9P272 454 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF319Q9P2F9 582 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 ONECUT1Q9UBC0 465 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 FBXL17Q9UF56 701 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 SVEP1Q4LDE5 3571 aa3.2□□□□□ -1.9
ATXN3-240ENST00000556339 IGHV3OR15-7A0A075B7D8 119 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 A0A1W2PRD5 423 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 A0A1W2PRF3 423 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 A0A1W2PRM7 423 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
ATXN3-240ENST00000556339 SRRM5B3KS81 715 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms