RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 CHRNA7P36544 502 aa11.1□□□□□ -0.63
SHMT2-222ENST00000555774 GAMTQ14353 236 aa11.1□□□□□ -0.63
SHMT2-222ENST00000555774 FAM78BQ5VT40 261 aa11.1□□□□□ -0.63
SHMT2-222ENST00000555774 SFRP2Q96HF1 295 aa11.1□□□□□ -0.63
SHMT2-222ENST00000555774 FUT9Q9Y231 359 aa11.1□□□□□ -0.63
SHMT2-222ENST00000555774 ZNF257Q9Y2Q1 563 aa11.1□□□□□ -0.63
SHMT2-222ENST00000555774 TRAV9-1A0A075B6T8 112 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 GCGP01275 180 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 IL3RAP26951 378 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 GCHFRP30047 84 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 ARSJQ5FYB0 599 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-222ENST00000555774 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-222ENST00000555774 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 C1orf159Q96HA4 380 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 FAM215AQ9Y5M1 114 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 LY96Q9Y6Y9 160 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 TNFSF4P23510 183 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 CCKARP32238 428 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
SHMT2-222ENST00000555774 TNFAIP6P98066 277 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-222ENST00000555774 STPG3Q8N7X2 389 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 NEUROG1Q92886 237 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 GAFA1Q96PS6 74 aa11.09□□□□□ -0.63
SHMT2-222ENST00000555774 SLC25A10Q9UBX3 287 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-222ENST00000555774 CA2P00918 260 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 IGHV3-7P01780 117 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 RD3LP0DJH9 198 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 AREGP15514 252 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 CNN1P51911 297 aaKnown RBP11.08□□□□□ -0.64
SHMT2-222ENST00000555774 EFNB3Q15768 340 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 LYG1Q8N1E2 194 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 OR5T1Q8NG75 326 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 TMEM18Q96B42 140 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 UHRF2Q96PU4 802 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 GCM1Q9NP62 436 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 PARD6AQ9NPB6 346 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 OR51B2Q9Y5P1 312 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 C9JCJ5 164 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 IGHV1-46P01743 117 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 C1QTNF9P0C862 333 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 PAX1P15863 534 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 PRR20EP86478 221 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 PRR20CP86479 221 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 PRR20DP86480 221 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 PRR20BP86481 221 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 PRR20AP86496 221 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 CLEC12BQ2HXU8 276 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 VHLLQ6RSH7 139 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 ZNF788Q6ZQV5 615 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 SSMEM1Q8WWF3 244 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 TMEM37Q8WXS4 190 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 DERL1Q9BUN8 251 aa11.08□□□□□ -0.64
SHMT2-222ENST00000555774 A0A0U1RQK1 487 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 SCO2A0A1W2PP80 73 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 ZNF320A2RRD8 509 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 UPK2O00526 184 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 PRCDQ00LT1 54 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 RTL8BQ17RB0 113 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 TEX36Q5VZQ5 186 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 Q6ZS92 163 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 TCF23Q7RTU1 214 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 LEAP2Q969E1 77 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 PLEKHA3Q9HB20 300 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 FKBP11Q9NYL4 201 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 ELOVL5Q9NYP7 299 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 YTHDF2Q9Y5A9 579 aaKnown RBP11.07□□□□□ -0.64
SHMT2-222ENST00000555774 TRAPPC1Q9Y5R8 145 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 MKRN2OSH3BPM6 223 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 GZMBP10144 247 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 SELLP14151 372 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 ALKBH2Q6NS38 261 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 SLC25A48Q6ZT89 311 aaKnown RBP11.07□□□□□ -0.64
SHMT2-222ENST00000555774 ZNF114Q8NC26 417 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 NUP37Q8NFH4 326 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 OR10G8Q8NGN5 311 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 SLC35E1Q96K37 410 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 RPUSD1Q9UJJ7 312 aaKnown RBP11.07□□□□□ -0.64
SHMT2-222ENST00000555774 PCNX2A6NKB5 2137 aa11.07□□□□□ -0.64
SHMT2-222ENST00000555774 CRYABP02511 175 aaKnown RBP11.06□□□□□ -0.64
SHMT2-222ENST00000555774 IRF2P14316 349 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 BMP5P22003 454 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 DDTP30046 118 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 CEACAM8P31997 349 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-222ENST00000555774 GPX4P36969 197 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-222ENST00000555774 SSX2Q16385 188 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 TEX38Q6PEX7 206 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 REC114Q7Z4M0 266 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 SGMS2Q8NHU3 365 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 ZCCHC14Q8WYQ9 949 aaKnown RBP11.06□□□□□ -0.64
SHMT2-222ENST00000555774 TMEM167BQ9NRX6 74 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 TP53TG5Q9Y2B4 290 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 NCOR1O75376 2440 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 hADV38S2A0JD32 116 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 J3QR06 171 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 YPEL3P61236 119 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-222ENST00000555774 FAM201AQ5SY85 155 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 UTF1Q5T230 341 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 PNKDQ8N490 385 aa11.06□□□□□ -0.64
SHMT2-222ENST00000555774 NOL4LQ96MY1 436 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms