RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 FAM222BQ8WU58 562 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 PATZ1Q9HBE1 687 aaKnown RBP13.35□□□□□ -0.27
TUBB3-209ENST00000555609 ELOVL5Q9NYP7 299 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 DKK4Q9UBT3 224 aa13.35□□□□□ -0.27
TUBB3-209ENST00000555609 SLC25A10Q9UBX3 287 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-209ENST00000555609 WDFY3Q8IZQ1 3526 aa13.34□□□□□ -0.27
TUBB3-209ENST00000555609 SPTBN2O15020 2390 aa13.34□□□□□ -0.27
TUBB3-209ENST00000555609 IL6RP08887 468 aaPredicted RBP13.34□□□□□ -0.27
TUBB3-209ENST00000555609 NPY1RP25929 384 aa13.34□□□□□ -0.27
TUBB3-209ENST00000555609 GCHFRP30047 84 aa13.34□□□□□ -0.27
TUBB3-209ENST00000555609 ZNF134P52741 427 aa13.34□□□□□ -0.27
TUBB3-209ENST00000555609 RPL39P5Q59GN2 51 aa13.34□□□□□ -0.27
TUBB3-209ENST00000555609 TIMM23BQ5SRD1 257 aa13.34□□□□□ -0.27
TUBB3-209ENST00000555609 MIC13Q5XKP0 118 aa13.34□□□□□ -0.27
TUBB3-209ENST00000555609 OR10G8Q8NGN5 311 aa13.34□□□□□ -0.27
TUBB3-209ENST00000555609 CNOT1A5YKK6 2376 aaKnown RBP13.34□□□□□ -0.27
TUBB3-209ENST00000555609 TRGV10A0A0A0MS01 117 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 KBTBD11-OT1A0A1B0GTJ5 212 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 A8MWP6 167 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 NKX2-8O15522 239 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 RAB4BP61018 213 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 HOXA4Q00056 320 aaPredicted RBP13.33□□□□□ -0.27
TUBB3-209ENST00000555609 ABHD12Q8N2K0 398 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 SLC24A4Q8NFF2 622 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 SDSLQ96GA7 329 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 FAM234AQ9H0X4 552 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 LINC00574Q9H8X3 128 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 PRNDQ9UKY0 176 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 ZNF257Q9Y2Q1 563 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 USF3Q68DE3 2245 aa13.33□□□□□ -0.27
TUBB3-209ENST00000555609 TIMP3P35625 211 aa13.33□□□□□ -0.28
TUBB3-209ENST00000555609 KLF3P57682 345 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-209ENST00000555609 C17orf58Q2M2W7 97 aa13.33□□□□□ -0.28
TUBB3-209ENST00000555609 SGMS2Q8NHU3 365 aa13.33□□□□□ -0.28
TUBB3-209ENST00000555609 OR2V2Q96R30 315 aa13.33□□□□□ -0.28
TUBB3-209ENST00000555609 C19orf24Q9BVV8 132 aa13.33□□□□□ -0.28
TUBB3-209ENST00000555609 A8MXE2 369 aa13.32□□□□□ -0.28
TUBB3-209ENST00000555609 EFNB3Q15768 340 aa13.32□□□□□ -0.28
TUBB3-209ENST00000555609 CLEC12BQ2HXU8 276 aa13.32□□□□□ -0.28
TUBB3-209ENST00000555609 OR5T1Q8NG75 326 aa13.32□□□□□ -0.28
TUBB3-209ENST00000555609 NEUROG1Q92886 237 aa13.32□□□□□ -0.28
TUBB3-209ENST00000555609 RHOVQ96L33 236 aa13.32□□□□□ -0.28
TUBB3-209ENST00000555609 IGLV3-9A0A075B6K5 115 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 TRAV3A0A0B4J244 114 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 TM4SF5O14894 197 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 C1QTNF9P0C862 333 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 DEFA4P12838 97 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 RPL19P84098 196 aaKnown RBP13.31□□□□□ -0.28
TUBB3-209ENST00000555609 PRR20EP86478 221 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 PRR20CP86479 221 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 PRR20DP86480 221 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 PRR20BP86481 221 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 PRR20AP86496 221 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 RTL8BQ17RB0 113 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 ARSJQ5FYB0 599 aaPredicted RBP13.31□□□□□ -0.28
TUBB3-209ENST00000555609 CT45A1Q5HYN5 189 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 OR4A47Q6IF82 309 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 TEX38Q6PEX7 206 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 PIP4P1Q86T03 277 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 MOGAT3Q86VF5 341 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 MRPL41Q8IXM3 137 aaKnown RBP13.31□□□□□ -0.28
TUBB3-209ENST00000555609 PNKDQ8N490 385 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 STPG3Q8N7X2 389 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 CT45A3Q8NHU0 189 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 C1orf159Q96HA4 380 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 SLC35E1Q96K37 410 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 C2orf88Q9BSF0 95 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 PRO1933Q9H354 126 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 PPP1R14DQ9NXH3 145 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 FKBP11Q9NYL4 201 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 IL36BQ9NZH7 164 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 SELENOTP62341 195 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 MRPS11P82912 194 aaKnown RBP13.31□□□□□ -0.28
TUBB3-209ENST00000555609 VKORC1L1Q8N0U8 176 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 ZNF664Q8N3J9 261 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 NDUFAF3Q9BU61 184 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 DERL1Q9BUN8 251 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 RNF7Q9UBF6 113 aa13.31□□□□□ -0.28
TUBB3-209ENST00000555609 SCO2A0A1W2PP80 73 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 CEACAM4O75871 244 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 SELENOVP59797 346 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 IGF2-ASQ6U949 168 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 ZNF114Q8NC26 417 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 ZNRF1Q8ND25 227 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 ZNF439Q8NDP4 499 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 OCC1Q8TAD7 63 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 IDI2-AS1Q9NZ38 188 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 SLC45A2Q9UMX9 530 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 GTF3C1Q12789 2109 aa13.3□□□□□ -0.28
TUBB3-209ENST00000555609 IGHV3OR15-7A0A075B7D8 119 aa13.29□□□□□ -0.28
TUBB3-209ENST00000555609 SAA2-SAA4A0A096LPE2 208 aa13.29□□□□□ -0.28
TUBB3-209ENST00000555609 TRBV9A0A0B4J1U6 114 aa13.29□□□□□ -0.28
TUBB3-209ENST00000555609 SAA2P0DJI9 122 aaPredicted RBP13.29□□□□□ -0.28
TUBB3-209ENST00000555609 PAFAH1B2P68402 229 aa13.29□□□□□ -0.28
TUBB3-209ENST00000555609 MSMPQ1L6U9 139 aa13.29□□□□□ -0.28
TUBB3-209ENST00000555609 COX19Q49B96 90 aa13.29□□□□□ -0.28
TUBB3-209ENST00000555609 LRP11Q86VZ4 500 aa13.29□□□□□ -0.28
TUBB3-209ENST00000555609 DCAF16Q9NXF7 216 aa13.29□□□□□ -0.28
TUBB3-209ENST00000555609 IL19Q9UHD0 177 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms