RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 MAS1LP35410 378 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 G6PCP35575 357 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 UCP3P55916 312 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 RNASE10Q5GAN6 216 aaKnown RBP10.49□□□□□ -0.73
SNX6-203ENST00000555416 TBC1D26Q86UD7 250 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 CMTM1Q8IZ96 169 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 TMEM229BQ8NBD8 167 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 CD300LFQ8TDQ1 290 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 SMIM4Q8WVI0 70 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 FANCD2OSQ96PS1 177 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 SOSTQ9BQB4 213 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 NXF2Q9GZY0 626 aaKnown RBP10.49□□□□□ -0.73
SNX6-203ENST00000555416 COMMD9Q9P000 198 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 NSG2Q9Y328 171 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 A0A0G2JLM5 398 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 IGLC7A0M8Q6 106 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 DBX1A6NMT0 343 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 MARCH11A6NNE9 402 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 NPIPB5A8MRT5 1133 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 OR2J3O76001 311 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 KRASP01116 189 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 TNFSF8P32971 234 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 HAPLN4Q86UW8 402 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 DMBX1Q8NFW5 382 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 OR10W1Q8NGF6 305 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 OR4A5Q8NH83 315 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 BORCS5Q969J3 196 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 PRR25Q96S07 402 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 DMRT1Q9Y5R6 373 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 S4R3C0 116 aa10.48□□□□□ -0.73
SNX6-203ENST00000555416 NOL3O60936 208 aaKnown RBP10.47□□□□□ -0.73
SNX6-203ENST00000555416 NDUFB8O95169 186 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 RAB3DO95716 219 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 IFNA6P05013 189 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 CRYGCP07315 174 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 PGAM2P15259 253 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 CTRB1P17538 263 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 PSMB6P28072 239 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 ECI1P42126 302 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 PPP5CP53041 499 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 EXOSC2Q13868 293 aaKnown RBP10.47□□□□□ -0.73
SNX6-203ENST00000555416 KLF5Q13887 457 aaPredicted RBP10.47□□□□□ -0.73
SNX6-203ENST00000555416 IL18Q14116 193 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 CTRB2Q6GPI1 263 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 STEAP1BQ6NZ63 245 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 LPCAT3Q6P1A2 487 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 ACSM6Q6P461 480 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 SLC38A6Q8IZM9 456 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 MCFD2Q8NI22 146 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 USMG5Q96IX5 58 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 RANGRFQ9HD47 186 aaPredicted RBP10.47□□□□□ -0.73
SNX6-203ENST00000555416 ZNF257Q9Y2Q1 563 aa10.47□□□□□ -0.73
SNX6-203ENST00000555416 TEX50A0A1B0GTY4 177 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 FAM223BA6NKX1 122 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 BMPR1BO00238 502 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 CTDSPLO15194 276 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 SAP30O75446 220 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 IGHV3-23P01764 117 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 TBPP20226 339 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 TAS2R19P59542 299 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 ATP5G2Q06055 141 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 IZUMO4Q1ZYL8 232 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 C15orf32Q32M92 178 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 SCGB2B2Q4G0G5 96 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 DEFB121Q5J5C9 76 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 IL34Q6ZMJ4 242 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 FAM223AQ8IWN6 122 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 ARRDC1Q8N5I2 433 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 NECAP1Q8NC96 275 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 OR13C8Q8NGS7 320 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 C15orf40Q8WUR7 153 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 SEC22AQ96IW7 307 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 TP53RKQ96S44 253 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 AIFM2Q9BRQ8 373 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 PEF1Q9UBV8 284 aaKnown RBP10.46□□□□□ -0.73
SNX6-203ENST00000555416 FBXL7Q9UJT9 491 aa10.46□□□□□ -0.73
SNX6-203ENST00000555416 CCDC160A6NGH7 325 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 HLA-AP01891 365 aaKnown RBP10.45□□□□□ -0.74
SNX6-203ENST00000555416 PIGPP57054 158 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 SYNJ2BPP57105 145 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 ERVK-16P61578 105 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 RND3P61587 244 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 MRPS10P82664 201 aaKnown RBP10.45□□□□□ -0.74
SNX6-203ENST00000555416 WT1-ASQ06250 92 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 KLK9Q2XQG4 91 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 SLC25A42Q86VD7 318 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 OR4C16Q8NGL9 310 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 TERB2Q8NHR7 220 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 MARCH1Q8TCQ1 289 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 CCDC140Q96MF4 163 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 COMMD5Q9GZQ3 224 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 KLK9Q9UKQ9 250 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 COL7A1Q02388 2944 aa10.45□□□□□ -0.74
SNX6-203ENST00000555416 IGLV11-55A0A075B6I3 123 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.44□□□□□ -0.74
SNX6-203ENST00000555416 DPPA5A6NC42 116 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 MFSD2BA6NFX1 497 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 PPP5D1E7EU14 171 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 GSTZ1O43708 216 aaPredicted RBP10.44□□□□□ -0.74
SNX6-203ENST00000555416 SPNP16150 400 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms