RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 OR52E5Q8NH55 327 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 MRPL18Q9H0U6 180 aaKnown RBP13.7□□□□□ -0.22
XRCC3-209ENST00000554913 IL36BQ9NZH7 164 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 LAMA5O15230 3695 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 YPEL1O60688 119 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 SERF1AO75920 110 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 RAB4AP20338 218 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 TOMM20LQ6UXN7 152 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 FAM214BQ7L5A3 538 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 YPEL2Q96QA6 119 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 TRIB1Q96RU8 372 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 NPVFQ9HCQ7 196 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 EP300Q09472 2414 aaPredicted RBP13.69□□□□□ -0.22
XRCC3-209ENST00000554913 F2Z2F3 143 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 CECR9P0C854 216 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 SP9P0CG40 484 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 TDGF1P3P51864 188 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 CASP6P55212 293 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 KRTCAP3Q53RY4 240 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 STPG3Q8N7X2 389 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 DUSP13Q9UII6 198 aa13.69□□□□□ -0.22
XRCC3-209ENST00000554913 HEATR1Q9H583 2144 aaKnown RBP13.69□□□□□ -0.22
XRCC3-209ENST00000554913 IGKV1D-17A0A075B6S4 117 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 CRISP2P16562 243 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 OR5I1Q13606 314 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 ZNF705AQ6ZN79 300 aaPredicted RBP13.68□□□□□ -0.22
XRCC3-209ENST00000554913 LEAP2Q969E1 77 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 FER1L6-AS2Q96M78 137 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 S1PR3Q99500 378 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 IFI27L2Q9H2X8 130 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 CLCF1Q9UBD9 225 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 IGHV3OR15-7A0A075B7D8 119 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 VWA1Q6PCB0 445 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 TRAT1Q6PIZ9 186 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 OR4P4Q8NGL7 312 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 OR1L6Q8NGR2 347 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 HSPB9Q9BQS6 159 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 JPT1Q9UK76 154 aa13.68□□□□□ -0.22
XRCC3-209ENST00000554913 LNP1A1A4G5 178 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 CDKN1AP38936 164 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 IER3P46695 156 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 LOXL3P58215 753 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 TPPP2P59282 170 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 TPTE2P1Q5T6R2 138 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 CGAP01215 116 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 MYOD1P15172 320 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 HOXC12P31275 282 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 LGALS4P56470 323 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 RHOBP62745 196 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 TEPPQ6URK8 271 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 ZNRF1Q8ND25 227 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 EAF1Q96JC9 268 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-209ENST00000554913 CHODLQ9H9P2 273 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 PCNX2A6NKB5 2137 aa13.67□□□□□ -0.22
XRCC3-209ENST00000554913 FCN1O00602 326 aa13.66□□□□□ -0.22
XRCC3-209ENST00000554913 ACTL6BO94805 426 aa13.66□□□□□ -0.22
XRCC3-209ENST00000554913 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
XRCC3-209ENST00000554913 OR2Z1Q8NG97 314 aa13.66□□□□□ -0.22
XRCC3-209ENST00000554913 PARD6AQ9NPB6 346 aa13.66□□□□□ -0.22
XRCC3-209ENST00000554913 CADP27708 2225 aa13.66□□□□□ -0.22
XRCC3-209ENST00000554913 SPENQ96T58 3664 aaKnown RBP13.66□□□□□ -0.22
XRCC3-209ENST00000554913 IGFBP2P18065 325 aa13.66□□□□□ -0.22
XRCC3-209ENST00000554913 MIR17HGQ75NE6 70 aa13.66□□□□□ -0.22
XRCC3-209ENST00000554913 MMD2Q8IY49 270 aa13.66□□□□□ -0.22
XRCC3-209ENST00000554913 C11orf52Q96A22 123 aa13.66□□□□□ -0.22
XRCC3-209ENST00000554913 OPN3Q9H1Y3 402 aaPredicted RBP13.66□□□□□ -0.22
XRCC3-209ENST00000554913 AHRRA9YTQ3 701 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 NPY1RP25929 384 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 KIR2DL2P43627 348 aaPredicted RBP13.65□□□□□ -0.22
XRCC3-209ENST00000554913 BAGE3Q86Y29 109 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 BAGE2Q86Y30 109 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 SLC24A4Q8NFF2 622 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 DDB2Q92466 427 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 FAM122AQ96E09 287 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 TRGV10A0A0A0MS01 117 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 C15orf61A6NNL5 157 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 SNURFLB1AK76 121 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 SPINK4O60575 86 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 CA2P00918 260 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 TNCP24821 2201 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 SPRNQ5BIV9 151 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 TEX43Q6ZNM6 134 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 OR8I2Q8N0Y5 310 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 TMEM178AQ8NBL3 297 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 PAM16Q9Y3D7 125 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 V9GYV3 84 aa13.65□□□□□ -0.22
XRCC3-209ENST00000554913 TRGV8A0A0C4DH27 118 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 C9JCJ5 164 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 ZNF883P0CG24 379 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 ESDP10768 282 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 ZNF25P17030 456 aaPredicted RBP13.64□□□□□ -0.23
XRCC3-209ENST00000554913 GUSBP1Q15486 140 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 RPEL1Q2QD12 228 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 ST6GALNAC3Q8NDV1 305 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 VN1R17PQ8TDU5 208 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 UHRF2Q96PU4 802 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 LRFN3Q9BTN0 628 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 HINT2Q9BX68 163 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 TRAV9-1A0A075B6T8 112 aa13.64□□□□□ -0.23
XRCC3-209ENST00000554913 IGHV2OR16-5A0A0B4J2B6 119 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms