RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PEF1Q9UBV8 284 aaKnown RBP8.21□□□□□ -1.1
SHMT2-213ENST00000554600 KLK11Q9UBX7 282 aa8.21□□□□□ -1.1
SHMT2-213ENST00000554600 ZNF256Q9Y2P7 627 aaPredicted RBP8.21□□□□□ -1.1
SHMT2-213ENST00000554600 ZNF257Q9Y2Q1 563 aa8.21□□□□□ -1.1
SHMT2-213ENST00000554600 TRAV3A0A0B4J244 114 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 FAM223BA6NKX1 122 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 TEX22C9J3V5 150 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 E7EUB6 86 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 UPK2O00526 184 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 RBMXL2O75526 392 aaKnown RBP8.2□□□□□ -1.1
SHMT2-213ENST00000554600 TPPPO94811 219 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 DHFRP00374 187 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 KRASP01116 189 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 TRBV12-3P01733 135 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 CD3DP04234 171 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 ZNF45Q02386 682 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 DCTN2Q13561 401 aaKnown RBP8.2□□□□□ -1.1
SHMT2-213ENST00000554600 IL18Q14116 193 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 TATDN3Q17R31 274 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 RPEL1Q2QD12 228 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 ZNF343Q6P1L6 599 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 C19orf35Q6ZS72 473 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 FAM223AQ8IWN6 122 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 NECAP1Q8NC96 275 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 ABHD1Q96SE0 405 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 HINT2Q9BX68 163 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 SLC2A9Q9NRM0 540 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 FBXL7Q9UJT9 491 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 CEPT1Q9Y6K0 416 aa8.2□□□□□ -1.1
SHMT2-213ENST00000554600 MARCH11A6NNE9 402 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 NPIPB5A8MRT5 1133 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 SNAPC5O75971 98 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 BRI3O95415 125 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 RAB3DO95716 219 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 ZNF735P0CB33 412 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 AREGP15514 252 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 PSMB6P28072 239 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 G6PCP35575 357 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 PPP5CP53041 499 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 SYNJ2BPP57105 145 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 CD69Q07108 199 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 POU2AF1Q16633 256 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 C15orf32Q32M92 178 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 SCGB2B2Q4G0G5 96 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 VAX1Q5SQQ9 334 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 ACSM6Q6P461 480 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 TBC1D26Q86UD7 250 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 SLC38A6Q8IZM9 456 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 OR6Q1Q8NGQ2 317 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 MTFP1Q9UDX5 166 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 S4R3C0 116 aa8.19□□□□□ -1.1
SHMT2-213ENST00000554600 A0A1B0GW64 132 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 GABARAPH6UMI1 98 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 IGHV3-23P01764 117 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 PI3P19957 117 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 TBPP20226 339 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 MECP2P51608 486 aaKnown RBP8.18□□□□□ -1.1
SHMT2-213ENST00000554600 UCP3P55916 312 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 TAS2R19P59542 299 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 OR2B8PP59922 312 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 MRPS10P82664 201 aaKnown RBP8.18□□□□□ -1.1
SHMT2-213ENST00000554600 HAPLN4Q86UW8 402 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 ARRDC1Q8N5I2 433 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 QTRT1Q9BXR0 403 aaKnown RBP8.18□□□□□ -1.1
SHMT2-213ENST00000554600 NSG2Q9Y328 171 aa8.18□□□□□ -1.1
SHMT2-213ENST00000554600 TRBV9A0A0B4J1U6 114 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 TEX50A0A1B0GTY4 177 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 NDUFB8O95169 186 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 SERPINE2P07093 398 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 TRAPPC2P0DI81 140 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 TRAPPC2BP0DI82 140 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 OR13C7P0DN81 318 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 SPNP16150 400 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 HIST1H1BP16401 226 aaKnown RBP8.17□□□□□ -1.1
SHMT2-213ENST00000554600 KLF5Q13887 457 aaPredicted RBP8.17□□□□□ -1.1
SHMT2-213ENST00000554600 ZNF585BQ52M93 769 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 STEAP1BQ6NZ63 245 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 TMEM229BQ8NBD8 167 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 OR10W1Q8NGF6 305 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 OR4D10Q8NGI6 311 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 OR9G4Q8NGQ1 327 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 OR1L8Q8NGR8 309 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 MCFD2Q8NI22 146 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 COPZ2Q9P299 210 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 RABL2AQ9UBK7 228 aaPredicted RBP8.17□□□□□ -1.1
SHMT2-213ENST00000554600 RSL24D1Q9UHA3 163 aaKnown RBP8.17□□□□□ -1.1
SHMT2-213ENST00000554600 RABL2BQ9UNT1 228 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 OR51B2Q9Y5P1 312 aa8.17□□□□□ -1.1
SHMT2-213ENST00000554600 IGLC7A0M8Q6 106 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 CGB1A6NKQ9 187 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 PPP5D1E7EU14 171 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 ZNF701M0R085 212 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-213ENST00000554600 BMPR1BO00238 502 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 CYB5BO43169 146 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 CRYGCP07315 174 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 CTRB1P17538 263 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 PIGPP57054 158 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 SSBP1Q04837 148 aaKnown RBP8.16□□□□□ -1.1
SHMT2-213ENST00000554600 MEF2DQ14814 521 aa8.16□□□□□ -1.1
SHMT2-213ENST00000554600 FAM209BQ5JX69 171 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms