RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SH3BGRL2Q9UJC5 107 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 DMRT1Q9Y5R6 373 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 PIEZO2Q9H5I5 2752 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 ACTL6BO94805 426 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 PCP4P48539 62 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 OR2T10Q8NGZ9 312 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 GCM1Q9NP62 436 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 ARFGEF3Q5TH69 2177 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 TRGV10A0A0A0MS01 117 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 TGOLN2O43493 480 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 RND1Q92730 232 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 WFIKKN1Q96NZ8 548 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 RNF7Q9UBF6 113 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 PITPNC1Q9UKF7 332 aa12.91□□□□□ -0.34
ARHGEF40-203ENST00000554514 SCO2A0A1W2PP80 73 aa12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 CCL8P80075 99 aa12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 ARSJQ5FYB0 599 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 LINC01551Q86U37 167 aa12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 PKDREJQ9NTG1 2253 aa12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 KBTBD11-OT1A0A1B0GTJ5 212 aa12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 CA2P00918 260 aa12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 NDUFB7P17568 137 aa12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 NPY1RP25929 384 aa12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 OPRK1P41145 380 aa12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 SEPSECSQ9HD40 501 aaKnown RBP12.9□□□□□ -0.34
ARHGEF40-203ENST00000554514 A0A1B0GWJ7 208 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 C15orf61A6NNL5 157 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 FOXH1O75593 365 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 LHBP01229 141 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 IGHV1-46P01743 117 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 IL6RP08887 468 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 MOB3BQ86TA1 216 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 ADGRG4Q8IZF6 3080 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 SLC24A4Q8NFF2 622 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 DDB2Q92466 427 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 ANAPC16Q96DE5 110 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 DMXL2Q8TDJ6 3036 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 RAI1Q7Z5J4 1906 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 PDE6DO43924 150 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 THBS3P49746 956 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 RAB7AP51149 207 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 SELENOVP59797 346 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 PAX5Q02548 391 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 C1orf185Q5T7R7 199 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 STPG3Q8N7X2 389 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 OR1P1Q8NH06 330 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 DIRC2Q96SL1 478 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 ZNF320A2RRD8 509 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 PRSS46E5RG02 174 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 GATCO43716 136 aaKnown RBP12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 TMEM183AQ8IXX5 376 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 C1orf174Q8IYL3 243 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 C1orf159Q96HA4 380 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 NPVFQ9HCQ7 196 aa12.89□□□□□ -0.35
ARHGEF40-203ENST00000554514 TMPRSS2O15393 492 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 RBFOX2O43251 390 aaKnown RBP eCLIP12.88□□□□□ -0.355e-12■■■□□ 17.9
ARHGEF40-203ENST00000554514 IGKV1-16P04430 117 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 IGFBP2P18065 325 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 TCF23Q7RTU1 214 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 PYGO2Q9BRQ0 406 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 PRDM13Q9H4Q3 707 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 KCNIP2Q9NS61 270 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 IDI2-AS1Q9NZ38 188 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 YTHDF2Q9Y5A9 579 aaKnown RBP12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 OR51B2Q9Y5P1 312 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 MPDU1O75352 247 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 CFHR2P36980 270 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 KCNIP4Q6PIL6 250 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 OR52E5Q8NH55 327 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 GAFA1Q96PS6 74 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 LRFN3Q9BTN0 628 aa12.88□□□□□ -0.35
ARHGEF40-203ENST00000554514 ACACAQ13085 2346 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 TRBV20OR9-2A0A075B6H5 130 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 FAM90A9PA6NNJ1 464 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 F6UZH7 168 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 GATA2P23769 480 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 KIR2DS2P43631 304 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 CR1LQ2VPA4 569 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 CYB5R2Q6BCY4 276 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 TEPPQ6URK8 271 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 FAM169BQ8N8A8 192 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 OR4P4Q8NGL7 312 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 VENTXO95231 258 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 CXorf1O96002 111 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 AMBPP02760 352 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 STAG3L2P0CL84 134 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 STAG3L3P0CL85 134 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 CGB3P0DN86 165 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 CGB7P0DN87 165 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 HIST1H1BP16401 226 aaKnown RBP12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 IL3RAP26951 378 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 HSPE1P61604 102 aaKnown RBP12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 AARDQ4LEZ3 155 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 WFDC8Q8IUA0 241 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 TP53TG5Q9Y2B4 290 aa12.87□□□□□ -0.35
ARHGEF40-203ENST00000554514 REG1BP48304 166 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 EFNB3Q15768 340 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 FAM216AQ8WUB2 273 aa12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 ZCCHC14Q8WYQ9 949 aaKnown RBP12.86□□□□□ -0.35
ARHGEF40-203ENST00000554514 ANKRD11Q6UB99 2663 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms