RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 UBALD1Q8TB05 177 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 MRPL30Q8TCC3 161 aaKnown RBP1.4□□□□□ -2.19
SRP54-204ENST00000553923 OR5P3Q8WZ94 311 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 TOMM6Q96B49 74 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 MALSU1Q96EH3 234 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 PYURFQ96I23 114 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 TSC22D3Q99576 134 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 SPIN2AQ99865 258 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 SPIN2BQ9BPZ2 258 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 SH3BGRL3Q9H299 93 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 PARVBQ9HBI1 364 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 TVP23BQ9NYZ1 205 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 OR5V1Q9UGF6 321 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 FUT9Q9Y231 359 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 CAMSAP1Q5T5Y3 1602 aa1.4□□□□□ -2.19
SRP54-204ENST00000553923 RPRD2Q5VT52 1461 aaKnown RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 ARHGEF10O15013 1369 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 A0A1W2PRE2 83 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 J3QRK9 145 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 SLC17A3O00476 420 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 LECT2O14960 151 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 OR2J2O76002 312 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 SOD1P00441 154 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 LHBP01229 141 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 C1QBP02746 253 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 LGALS1P09382 135 aaKnown RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 TFPTP0C1Z6 253 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 SMIM10L2AP0DMW4 78 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 SMIM10L2BP0DMW5 78 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 SCGB1A1P11684 91 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 MDKP21741 143 aaPredicted RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 HIST1H2BOP23527 126 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 NPPCP23582 126 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 S100A4P26447 101 aaKnown RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 CASP1P29466 404 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 HIST1H2BBP33778 126 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 CA5AP35218 305 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 CD200P41217 278 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 RPL27AP46776 148 aaKnown RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 EIF2B2P49770 351 aaKnown RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 PIGPP57054 158 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 HIST1H2BDP58876 126 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 TAS2R30P59541 319 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 TAS2R20P59543 309 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 HIST1H2BCP62807 126 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 MEF2BQ02080 365 aaPredicted RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 ZNF816Q0VGE8 651 aaPredicted RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 HIST2H2BEQ16778 126 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 LTC4SQ16873 150 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 SCGB2B2Q4G0G5 96 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 AADACL3Q5VUY0 350 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 Q5W150 140 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 NOXRED1Q6NXP6 359 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 ZNF880Q6PDB4 577 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 Q6Q795 121 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 ZNF322Q6U7Q0 402 aaPredicted RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 TCF24Q7RTU0 167 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 LYZL2Q7Z4W2 148 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 ZFAND2AQ8N6M9 145 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 OR5J2Q8NH18 312 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 SLC7A6Q92536 515 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 HIST1H2BHQ93079 126 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 RNASE6Q93091 150 aaKnown RBP1.39□□□□□ -2.19
SRP54-204ENST00000553923 LYSMD1Q96S90 227 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 SERPINI1Q99574 410 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 HIST1H2BNQ99877 126 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 HIST1H2BMQ99879 126 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 TTTY13Q9BZ97 58 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 IL36BQ9NZH7 164 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 CKLFQ9UBR5 152 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 TP73-AS1Q9UF72 201 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 PCTPQ9UKL6 214 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 ERGIC3Q9Y282 383 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 LINC00588Q9Y4M8 146 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 ASB4Q9Y574 426 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 ARAP3Q8WWN8 1544 aa1.39□□□□□ -2.19
SRP54-204ENST00000553923 VWA8A3KMH1 1905 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 NACADO15069 1562 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 HECW2Q9P2P5 1572 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 NACAE9PAV3 2078 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 IGLV3-16A0A075B6K0 115 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 TRBV19A0A075B6N1 114 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 IGKV1OR2-108A0A075B7D4 117 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 IGHV3-73A0A0B4J1V6 119 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 TRAV41A0A0B4J266 112 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 SPRR5A0A1B0GTR4 108 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 MDFIC2A0A1B0GVS7 189 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 DUXBA0A1W2PPF3 345 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 PRORSD1PA6NEY8 169 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 ARL5CA6NH57 179 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 ZNF98A6NK75 572 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 TRAPPC2LH3BP13 241 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 H3BQ85 93 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 LY6HO94772 140 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 IFNA10P01566 189 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 IGHV1-69P01742 117 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 IGHG2P01859 326 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 PRM2P04554 102 aa1.38□□□□□ -2.19
SRP54-204ENST00000553923 CSN2P05814 226 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms