RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 TMED6Q8WW62 240 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 C5orf30Q96GV9 206 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 CIB3Q96Q77 187 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-209ENST00000553659 S1PR3Q99500 378 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 IFI27L2Q9H2X8 130 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 ONECUT1Q9UBC0 465 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 PLXNB1O43157 2135 aa12.89□□□□□ -0.35
ACTN1-209ENST00000553659 FAM24AA6NFZ4 105 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 TEX46H3BTG2 121 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 M0R1X1 148 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 TXNL1O43396 289 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 FGF2P09038 288 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 SELLP14151 372 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 SULT1A1P50225 295 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 RPL31P62899 125 aaKnown RBP12.88□□□□□ -0.35
ACTN1-209ENST00000553659 TAGLNQ01995 201 aaKnown RBP12.88□□□□□ -0.35
ACTN1-209ENST00000553659 FAM74A1Q5RGS3 127 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 IL34Q6ZMJ4 242 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 H2BFWTQ7Z2G1 175 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 STPG2Q8N412 459 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 C8orf31Q8N9H6 132 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 OR4S2Q8NH73 311 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 ZNF714Q96N38 554 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 AIFM2Q9BRQ8 373 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 MAGT1Q9H0U3 335 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 SIRT7Q9NRC8 400 aa12.88□□□□□ -0.35
ACTN1-209ENST00000553659 STRAPQ9Y3F4 350 aaKnown RBP12.88□□□□□ -0.35
ACTN1-209ENST00000553659 PRKDCP78527 4128 aaKnown RBP12.88□□□□□ -0.35
ACTN1-209ENST00000553659 A0A1W2PPH5 198 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 IGSF23A1L1A6 192 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 C17orf98A8MV24 154 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 RNASEK-C17orf49H0YIS7 233 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 NPFFO15130 113 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 S1PR2O95136 353 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 ZP3P21754 424 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 HBG1P69891 147 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 HBG2P69892 147 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 ZNF816Q0VGE8 651 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-209ENST00000553659 FAM71F2Q6NXP2 309 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 HEPN1Q6WQI6 88 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 TCF23Q7RTU1 214 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 ZNF439Q8NDP4 499 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 OR1S2Q8NGQ3 325 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 MARC2Q969Z3 335 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 GNPNAT1Q96EK6 184 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-209ENST00000553659 SMIM3Q9BZL3 60 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 PARP11Q9NR21 331 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 HSPB7Q9UBY9 170 aa12.87□□□□□ -0.35
ACTN1-209ENST00000553659 LINC00473A8K010 186 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 ZNF705EA8MWA4 302 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-209ENST00000553659 RAMP3O60896 148 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 SPP1P10451 314 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 NQO2P16083 231 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 UBE2KP61086 200 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 TNFRSF9Q07011 255 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 Q6ZRM9 215 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 C1orf122Q6ZSJ8 110 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 SLC25A48Q6ZT89 311 aaKnown RBP12.86□□□□□ -0.35
ACTN1-209ENST00000553659 CCDC28AQ8IWP9 274 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 Q8N7P7 452 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 OR5R1Q8NH85 324 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 C8orf46Q8TAG6 207 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 R3HDM4Q96D70 268 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 ATP5SQ99766 215 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 PSENENQ9NZ42 101 aa12.86□□□□□ -0.35
ACTN1-209ENST00000553659 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 UMAD1C9J7I0 102 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 KRASP01116 189 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 IFNA5P01569 189 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 NFYBP25208 207 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 G6PCP35575 357 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 PAX9P55771 341 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 RPP30P78346 268 aaKnown RBP12.85□□□□□ -0.35
ACTN1-209ENST00000553659 NHLH2Q02577 135 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 PRB3Q04118 309 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-209ENST00000553659 AARDQ4LEZ3 155 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 FBLN7Q53RD9 439 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 CT45A1Q5HYN5 189 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 COMMD1Q8N668 190 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 OR5C1Q8NGR4 320 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 OR52E5Q8NH55 327 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 CT45A3Q8NHU0 189 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 TNFRSF14Q92956 283 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 CLCC1Q96S66 551 aa12.85□□□□□ -0.35
ACTN1-209ENST00000553659 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
ACTN1-209ENST00000553659 A0A1W2PRD5 423 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 A0A1W2PRF3 423 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 A0A1W2PRM7 423 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 SHOXO15266 292 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 FCGR3BO75015 233 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 SAA4P35542 130 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 UBE2E1P51965 193 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 ZNF134P52741 427 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 F2RL1P55085 397 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 DLX1P56177 255 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 KLRD1Q13241 179 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 ATP6V1FQ16864 119 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 OR2B11Q5JQS5 317 aa12.84□□□□□ -0.35
ACTN1-209ENST00000553659 NCR3LG1Q68D85 454 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms