RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SLA2Q9H6Q3 261 aa17.73■□□□□ 0.43
TDP1-206ENST00000553569 FAM212BQ9NTI7 297 aaPredicted RBP17.73■□□□□ 0.43
TDP1-206ENST00000553569 SLC2A8Q9NY64 477 aa17.73■□□□□ 0.43
TDP1-206ENST00000553569 TEX22C9J3V5 150 aa17.72■□□□□ 0.43
TDP1-206ENST00000553569 H0Y980 276 aa17.72■□□□□ 0.43
TDP1-206ENST00000553569 IGHV3-11P01762 117 aa17.72■□□□□ 0.43
TDP1-206ENST00000553569 SERPINE2P07093 398 aa17.72■□□□□ 0.43
TDP1-206ENST00000553569 IL6RP08887 468 aaPredicted RBP17.72■□□□□ 0.43
TDP1-206ENST00000553569 OR9G9P0C7N8 305 aa17.72■□□□□ 0.43
TDP1-206ENST00000553569 DEFA5Q01523 94 aa17.72■□□□□ 0.43
TDP1-206ENST00000553569 MRPL41Q8IXM3 137 aaKnown RBP17.72■□□□□ 0.43
TDP1-206ENST00000553569 LINC00482Q8N8I6 264 aa17.72■□□□□ 0.43
TDP1-206ENST00000553569 TP53RKQ96S44 253 aa17.72■□□□□ 0.43
TDP1-206ENST00000553569 ALX4Q9H161 411 aaPredicted RBP17.72■□□□□ 0.43
TDP1-206ENST00000553569 C3orf85A0A1B0GTC6 90 aa17.71■□□□□ 0.43
TDP1-206ENST00000553569 A0A1B0GW64 132 aa17.71■□□□□ 0.43
TDP1-206ENST00000553569 E7EUB6 86 aa17.71■□□□□ 0.43
TDP1-206ENST00000553569 H3BUA1 57 aa17.71■□□□□ 0.43
TDP1-206ENST00000553569 IGKV1-39P01597 117 aa17.71■□□□□ 0.43
TDP1-206ENST00000553569 IGKV1D-39P04432 117 aa17.71■□□□□ 0.43
TDP1-206ENST00000553569 SURF2Q15527 256 aaPredicted RBP17.71■□□□□ 0.43
TDP1-206ENST00000553569 ZNF57Q68EA5 555 aaPredicted RBP17.71■□□□□ 0.43
TDP1-206ENST00000553569 ADAD2Q8NCV1 583 aaKnown RBP17.71■□□□□ 0.43
TDP1-206ENST00000553569 P2RX4Q99571 388 aa17.71■□□□□ 0.43
TDP1-206ENST00000553569 NSG2Q9Y328 171 aa17.71■□□□□ 0.43
TDP1-206ENST00000553569 A6NHS1 94 aa17.7■□□□□ 0.42
TDP1-206ENST00000553569 G3V4G9 280 aa17.7■□□□□ 0.42
TDP1-206ENST00000553569 SP6Q3SY56 376 aa17.7■□□□□ 0.42
TDP1-206ENST00000553569 TRIQKQ629K1 86 aa17.7■□□□□ 0.42
TDP1-206ENST00000553569 RTBDNQ9BSG5 229 aaPredicted RBP17.7■□□□□ 0.42
TDP1-206ENST00000553569 COMMD5Q9GZQ3 224 aa17.7■□□□□ 0.42
TDP1-206ENST00000553569 C5orf66Q9H5L9 145 aa17.7■□□□□ 0.42
TDP1-206ENST00000553569 GPR132Q9UNW8 380 aa17.7■□□□□ 0.42
TDP1-206ENST00000553569 TEX13DA0A0J9YY54 714 aaPredicted RBP17.69■□□□□ 0.42
TDP1-206ENST00000553569 I3L521 148 aa17.69■□□□□ 0.42
TDP1-206ENST00000553569 PRH1P02810 166 aa17.69■□□□□ 0.42
TDP1-206ENST00000553569 LGALS1P09382 135 aaKnown RBP17.69■□□□□ 0.42
TDP1-206ENST00000553569 INPP1P49441 399 aa17.69■□□□□ 0.42
TDP1-206ENST00000553569 OR2B8PP59922 312 aa17.69■□□□□ 0.42
TDP1-206ENST00000553569 TRIM16LQ309B1 348 aa17.69■□□□□ 0.42
TDP1-206ENST00000553569 CNPY1Q3B7I2 92 aa17.69■□□□□ 0.42
TDP1-206ENST00000553569 GDPD1Q8N9F7 314 aa17.69■□□□□ 0.42
TDP1-206ENST00000553569 OR11H1Q8NG94 326 aa17.69■□□□□ 0.42
TDP1-206ENST00000553569 C13orf42A0A1B0GVH6 325 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 CGB1A6NKQ9 187 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 SNAPC5O75971 98 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 REG1AP05451 166 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 AREGP15514 252 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 IGLL1P15814 213 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 RUNX1Q01196 453 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 BAK1Q16611 211 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 C19orf35Q6ZS72 473 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 H2BFWTQ7Z2G1 175 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 SLC25A42Q86VD7 318 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 TTC9CQ8N5M4 171 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 WFDC9Q8NEX5 89 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 SEC22AQ96IW7 307 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 NAA60Q9H7X0 242 aa17.68■□□□□ 0.42
TDP1-206ENST00000553569 OR5AC1P0C628 307 aa17.67■□□□□ 0.42
TDP1-206ENST00000553569 OXLD1Q5BKU9 147 aa17.67■□□□□ 0.42
TDP1-206ENST00000553569 OR1N2Q8NGR9 330 aa17.67■□□□□ 0.42
TDP1-206ENST00000553569 SDHCQ99643 169 aaPredicted RBP17.67■□□□□ 0.42
TDP1-206ENST00000553569 QTRT1Q9BXR0 403 aaKnown RBP17.67■□□□□ 0.42
TDP1-206ENST00000553569 AKR1C2P52895 323 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 ZNF45Q02386 682 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 ZNF616Q08AN1 781 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 FHL3Q13643 280 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 SAMD5Q5TGI4 173 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 DPF1Q92782 380 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 SCGB3A2Q96PL1 93 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 TSC22D3Q99576 134 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 HINT2Q9BX68 163 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 PRNDQ9UKY0 176 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 ZNF257Q9Y2Q1 563 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 OR51B2Q9Y5P1 312 aa17.66■□□□□ 0.42
TDP1-206ENST00000553569 A0A0G2JLM5 398 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 LINC00854A0A1B0GVQ3 168 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 CRYM-AS1A6NIL9 109 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 NPIPB5A8MRT5 1133 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 RBMXL2O75526 392 aaKnown RBP17.65■□□□□ 0.42
TDP1-206ENST00000553569 BRI3O95415 125 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 FGF2P09038 288 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 UCP1P25874 307 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 PSMB6P28072 239 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 RHOGP84095 191 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 CADM3Q8N126 398 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 OR1L8Q8NGR8 309 aa17.65■□□□□ 0.42
TDP1-206ENST00000553569 RCC1LQ96I51 464 aaKnown RBP17.65■□□□□ 0.42
TDP1-206ENST00000553569 IGHV4OR15-8A0A075B7B6 117 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 A0A087WW49 117 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 TEX50A0A1B0GTY4 177 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 C15orf61A6NNL5 157 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 B3GALNT1O75752 331 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 IGKV1-5P01602 117 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 OR8U8P0C7N1 319 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 TRAPPC2P0DI81 140 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 TRAPPC2BP0DI82 140 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 IZUMO4Q1ZYL8 232 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 OR10W1Q8NGF6 305 aa17.64■□□□□ 0.41
TDP1-206ENST00000553569 OR4A16Q8NH70 328 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms