RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 CHST5Q9GZS9 411 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 NAA50Q9GZZ1 169 aaKnown RBP3.74□□□□□ -1.81
CKAP4-203ENST00000553039 PARP12Q9H0J9 701 aaKnown RBP3.74□□□□□ -1.81
CKAP4-203ENST00000553039 ADGRL4Q9HBW9 690 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 NDUFB11Q9NX14 153 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 CLEC2DQ9UHP7 191 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 OR52A1Q9UKL2 312 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 IKZF2Q9UKS7 526 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 ING4Q9UNL4 249 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 LSM2Q9Y333 95 aaKnown RBP3.74□□□□□ -1.81
CKAP4-203ENST00000553039 TMED3Q9Y3Q3 217 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.73□□□□□ -1.81
CKAP4-203ENST00000553039 A0A1W2PQL4 384 aaPredicted RBP3.73□□□□□ -1.81
CKAP4-203ENST00000553039 TMEM30CPA0ZSE6 113 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 FAM223BA6NKX1 122 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 PRR32B1ATL7 298 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 ZNF670-ZNF695F2Z2N8 137 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 H7C2Y5 167 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 BMPR1BO00238 502 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 TRBV12-3P01733 135 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 CD74P04233 296 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 GSTT2P0CG29 244 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 GSTT2BP0CG30 244 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 MIFP14174 115 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 MYOD1P15172 320 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 GADD45AP24522 165 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 FCGR2BP31994 310 aaPredicted RBP3.73□□□□□ -1.81
CKAP4-203ENST00000553039 SERPINB10P48595 397 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 MRPL28Q13084 256 aaKnown RBP3.73□□□□□ -1.81
CKAP4-203ENST00000553039 CTF1Q16619 201 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 OR2G6Q5TZ20 316 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 RSBN1Q5VWQ0 802 aaPredicted RBP3.73□□□□□ -1.81
CKAP4-203ENST00000553039 SUMO4Q6EEV6 95 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 ZNF322Q6U7Q0 402 aaPredicted RBP3.73□□□□□ -1.81
CKAP4-203ENST00000553039 Q6ZTC4 211 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 FAM220AQ7Z4H9 259 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 LHFPL3Q86UP9 236 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 FAM223AQ8IWN6 122 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 SLC35F2Q8IXU6 374 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 SYS1Q8N2H4 156 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 OR56B1Q8NGI3 324 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 OR5B3Q8NH48 314 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 GRPEL2Q8TAA5 225 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 C4orf36Q96KX1 117 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 C17orf77Q96MU5 243 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 OPALINQ96PE5 141 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 TBX5Q99593 518 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 TSNAXQ99598 290 aaKnown RBP3.73□□□□□ -1.81
CKAP4-203ENST00000553039 C5orf66Q9H5L9 145 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 AAMDCQ9H7C9 122 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 Q9H8V8 135 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 OR2S2Q9NQN1 319 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 GSN-AS1Q9NRJ2 163 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 COA4Q9NYJ1 87 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 MRPL27Q9P0M9 148 aaKnown RBP3.73□□□□□ -1.81
CKAP4-203ENST00000553039 MDFICQ9P1T7 246 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 RABL2AQ9UBK7 228 aaPredicted RBP3.73□□□□□ -1.81
CKAP4-203ENST00000553039 METTL1Q9UBP6 276 aaKnown RBP3.73□□□□□ -1.81
CKAP4-203ENST00000553039 R4GMQ9 66 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 VPS13DQ5THJ4 4388 aa3.73□□□□□ -1.81
CKAP4-203ENST00000553039 HSPG2P98160 4391 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 IGHV3-43A0A0B4J1X8 118 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 TRAV39A0A0B4J263 110 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 LOC100506127A0A0U1RQW1 187 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 OR4C46A6NHA9 309 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 OR5H14A6NHG9 310 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 C15orf65H3BRN8 121 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 J3QLW9 94 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 TSC22D2O75157 780 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 CA2P00918 260 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 IFNA5P01569 189 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 IGHV3-43DP0DP04 118 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 ZNF19P17023 458 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 ATF1P18846 271 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 CELP19835 753 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 CCL1P22362 96 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 HCCSP53701 268 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 VBP1P61758 197 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 NCS1P62166 190 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 LSM3P62310 102 aaKnown RBP3.72□□□□□ -1.81
CKAP4-203ENST00000553039 ZNF85Q03923 595 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 TPBGQ13641 420 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 SPCS2Q15005 226 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 CDK5R1Q15078 307 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 TRAM1Q15629 374 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 SSX1Q16384 188 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 MORN2Q502X0 79 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 ZNF585BQ52M93 769 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 TMEM41BQ5BJD5 291 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 C6orf183Q5T699 404 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 ELP2Q6IA86 826 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 CD164L2Q6UWJ8 174 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 PLEKHG7Q6ZR37 379 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 UTS2BQ765I0 119 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 C15orf53Q8NAA6 179 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 ZNF485Q8NCK3 441 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 ZNF439Q8NDP4 499 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 OR2AK2Q8NG84 335 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 CCDC107Q8WV48 283 aa3.72□□□□□ -1.81
CKAP4-203ENST00000553039 SULT4A1Q9BR01 284 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms