RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 FBXL17Q9UF56 701 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 JPT1Q9UK76 154 aa7.54□□□□□ -1.2
SLC48A1-209ENST00000552003 IGHV3-43A0A0B4J1X8 118 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 ANKRD20A5PA0PJZ0 165 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 IGLL5B9A064 214 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 SDCBPO00560 298 aaPredicted RBP7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 GSTT2P0CG29 244 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 AKAIN1P0CW23 69 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 IGHV3-43DP0DP04 118 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 IL7P13232 177 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 HLA-DMAP28067 261 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 FAUP35544 74 aaKnown RBP7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 OR3A3P47888 321 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 HTD2P86397 168 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 MEF2DQ14814 521 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 RNASE10Q5GAN6 216 aaKnown RBP7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 ZNF57Q68EA5 555 aaPredicted RBP7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 LIN54Q6MZP7 749 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 OR52M1Q8NGK5 317 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 OR1L1Q8NH94 360 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 OR10J5Q8NHC4 309 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 IL1F10Q8WWZ1 152 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 SDHCQ99643 169 aaPredicted RBP7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 GINS4Q9BRT9 223 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 AGRNO00468 2067 aa7.53□□□□□ -1.2
SLC48A1-209ENST00000552003 IGKV1D-8A0A087WSZ0 117 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 TRBV6-7A0A0A0MS04 114 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 J3QRK9 145 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 BET1O15155 118 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 LANCL1O43813 399 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 RBMXL2O75526 392 aaKnown RBP7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 UPK1BO75841 260 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 TRGV3P03979 118 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 CD74P04233 296 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 CD3DP04234 171 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 FCER2P06734 321 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 SCTP09683 121 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 RBMY1A1P0DJD3 496 aaKnown RBP7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 INAFM2P0DMQ5 153 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 ZBTB25P24278 435 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 HRH1P35367 487 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 ZNF137PP52743 207 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 TCTAP57738 103 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 RBMS2Q15434 407 aaKnown RBP7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 BAK1Q16611 211 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 GUCA2BQ16661 112 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 Q3ZCU0 254 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 STEAP1BQ6NZ63 245 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 SLC25A48Q6ZT89 311 aaKnown RBP7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 TMEM17Q86X19 198 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 LYSMD2Q8IV50 215 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 ZNF439Q8NDP4 499 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 LFNGQ8NES3 379 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 NPBQ8NG41 125 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 BORCS5Q969J3 196 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 OR2S2Q9NQN1 319 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 GFOD1Q9NXC2 390 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 EHFQ9NZC4 300 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 GNG12Q9UBI6 72 aa7.52□□□□□ -1.21
SLC48A1-209ENST00000552003 IGKV1-6A0A0C4DH72 117 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 NAP1L6A6NFF2 107 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 CENPXA8MT69 81 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 DISC1C4P0D8 188 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 NBR2O15453 112 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 YPEL1O60688 119 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 NDUFA3O95167 84 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 RAB3DO95716 219 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 PMP2P02689 132 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 TSPAN5P62079 268 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 KLF9Q13886 244 aaPredicted RBP7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 IGSF11Q5DX21 431 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 CT45A1Q5HYN5 189 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 LY6G6FQ5SQ64 297 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 ZNF660Q6AZW8 331 aaPredicted RBP7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 UNQ5815/PRO19632Q6UWF5 114 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 Q6ZR54 194 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 ARRDC1Q8N5I2 433 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 OR52L2PQ8NGH6 319 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 OR10V1Q8NGI7 309 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 CT45A3Q8NHU0 189 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 EDARADDQ8WWZ3 215 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 YPEL2Q96QA6 119 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 C7orf50Q9BRJ6 194 aaKnown RBP7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 FBXL7Q9UJT9 491 aa7.51□□□□□ -1.21
SLC48A1-209ENST00000552003 M0QYG6 137 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 PPP1CCP36873 323 aaKnown RBP7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 CEACAM6P40199 344 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 RFX2P48378 723 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 MFAP2P55001 183 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 DEFA1P59665 94 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 DEFA3P59666 94 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 HERV-K104P61576 105 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 GNMTQ14749 295 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 LGALS9BQ3B8N2 356 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 AKIRIN2Q53H80 203 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 C5orf24Q7Z6I8 188 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 PPP1R27Q86WC6 154 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 H1FOOQ8IZA3 346 aaPredicted RBP7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 TMEM217Q8N7C4 229 aa7.5□□□□□ -1.21
SLC48A1-209ENST00000552003 TCTEX1D1Q8N7M0 179 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms