RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 UPK2O00526 184 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 OR2C1O95371 312 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 FOLR2P14207 255 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 S100GP29377 79 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 ARL3P36405 182 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 FXYD4P59646 89 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 ERVK-16P61578 105 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 HAGHQ16775 308 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 DEFB114Q30KQ6 69 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 ANKRD55Q3KP44 614 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 CD300EQ496F6 205 aaPredicted RBP8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 TMEM69Q5SWH9 247 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 AADACL3Q5VUY0 350 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 LPCAT3Q6P1A2 487 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 DMBX1Q8NFW5 382 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 CMTM3Q96MX0 182 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 FANCD2OSQ96PS1 177 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 ADAM30Q9UKF2 790 aa8.25□□□□□ -1.09
VTI1BP3-201ENST00000550220 E7EUB6 86 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 NDUFB8O95169 186 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 TNFAIP8O95379 198 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 CLEC3BP05452 202 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 PTHLHP12272 177 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 AREGP15514 252 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 NAT1P18440 290 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 PTBP1P26599 531 aaKnown RBP eCLIP8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 GNRHRP30968 328 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 PRSS3P35030 304 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 RPS19P39019 145 aaKnown RBP8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 OR2B8PP59922 312 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 CLEC19AQ6UXS0 136 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 ZNF818PQ6ZRF7 136 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 SLC16A13Q7RTY0 426 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 TMEM17Q86X19 198 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 SAMD12Q8N8I0 201 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 TSPAN14Q8NG11 270 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 OR5H2Q8NGV7 314 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 OR6F1Q8NGZ6 308 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 IL17DQ8TAD2 202 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 MARC2Q969Z3 335 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 NEURL2Q9BR09 285 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 QTRT1Q9BXR0 403 aaKnown RBP8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 TMEM140Q9NV12 185 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 EHFQ9NZC4 300 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 DMRT1Q9Y5R6 373 aa8.24□□□□□ -1.09
VTI1BP3-201ENST00000550220 IGLV11-55A0A075B6I3 123 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 ZNF320A2RRD8 509 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 ZNF785A8K8V0 405 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 PPP5D1E7EU14 171 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 TRAPPC2P0DI81 140 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 TRAPPC2BP0DI82 140 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 CBLN1P23435 193 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 F2RP25116 425 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 ELLP55199 621 aaPredicted RBP8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 CD81P60033 236 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 GUCA2BQ16661 112 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 ZNF57Q68EA5 555 aaPredicted RBP8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 OR1L6Q8NGR2 347 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 OR1L8Q8NGR8 309 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 OR51H1Q8NH63 302 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 VN1R17PQ8TDU5 208 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 SLC25A46Q96AG3 418 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 MOB3AQ96BX8 217 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 YIPF6Q96EC8 236 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 ATP6V0BQ99437 205 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 ZNF2Q9BSG1 426 aaPredicted RBP8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 ZC4H2Q9NQZ6 224 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 FAM212BQ9NTI7 297 aaPredicted RBP8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 FKBP11Q9NYL4 201 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 ANAPC10Q9UM13 185 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 CEPT1Q9Y6K0 416 aa8.23□□□□□ -1.09
VTI1BP3-201ENST00000550220 TRAV25A0A0B4J276 109 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 A0A1B0GW64 132 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 IGLC7A0M8Q6 106 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 IZUMO1RA6ND01 250 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 A8MWP6 167 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 GPR31O00270 319 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 PGLYRP1O75594 196 aaPredicted RBP8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 SNAPC5O75971 98 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 MYOD1P15172 320 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 RFX2P48378 723 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 TAS2R20P59543 309 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 PLET1Q6UQ28 207 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 ADAMTSL5Q6ZMM2 481 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 DGCR14Q96DF8 476 aaKnown RBP8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 CCDC140Q96MF4 163 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 GPHA2Q96T91 129 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 TSC22D3Q99576 134 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 EDA2RQ9HAV5 297 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 SCPEP1Q9HB40 452 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 UFC1Q9Y3C8 167 aa8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 HUWE1Q7Z6Z7 4374 aaKnown RBP8.22□□□□□ -1.09
VTI1BP3-201ENST00000550220 MEIS3P1A6NDR6 274 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 CGB1A6NKQ9 187 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 MARCH11A6NNE9 402 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 OR11H12B2RN74 326 aa8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 HLA-AP01891 365 aaKnown RBP8.21□□□□□ -1.1
VTI1BP3-201ENST00000550220 APOA1P02647 267 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms