RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 A8MWP6 167 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 PPP5D1E7EU14 171 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 KBTBD11O94819 623 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 DHFRP00374 187 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 APOA1P02647 267 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 CBLN1P23435 193 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 GUCA2BQ16661 112 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 FAM106AQ4KMX7 169 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 UBE2NLQ5JXB2 153 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 PUSL1Q8N0Z8 303 aaKnown RBP9.66□□□□□ -0.86
PTCH1-218ENST00000548945 OR4S2Q8NH73 311 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 TMEM167AQ8TBQ9 72 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 DIRAS2Q96HU8 199 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 OR2A7Q96R45 310 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 HSD17B10Q99714 261 aaKnown RBP9.66□□□□□ -0.86
PTCH1-218ENST00000548945 WFDC10AQ9H1F0 79 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 SLC2A9Q9NRM0 540 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 FBXL7Q9UJT9 491 aa9.66□□□□□ -0.86
PTCH1-218ENST00000548945 RBMX2Q9Y388 322 aaKnown RBP9.66□□□□□ -0.86
PTCH1-218ENST00000548945 FAM25AB3EWG3 89 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 FAM25CB3EWG5 89 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 FAM25GB3EWG6 89 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 OR2C1O95371 312 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 IGLV2-14P01704 120 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 CRYGCP07315 174 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 IL6RP08887 468 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-218ENST00000548945 ZNF735P0CB33 412 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 HIST1H1BP16401 226 aaKnown RBP9.65□□□□□ -0.86
PTCH1-218ENST00000548945 PTBP1P26599 531 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTCH1-218ENST00000548945 ARL3P36405 182 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 RPL27AP46776 148 aaKnown RBP9.65□□□□□ -0.86
PTCH1-218ENST00000548945 ANKRD55Q3KP44 614 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 CDNFQ49AH0 187 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 HACD4Q5VWC8 232 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 ZNF57Q68EA5 555 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-218ENST00000548945 OR4A47Q6IF82 309 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 CNIH2Q6PI25 160 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 OR5H6Q8NGV6 325 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 BORCS5Q969J3 196 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 WDR89Q96FK6 387 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-218ENST00000548945 FANCD2OSQ96PS1 177 aa9.65□□□□□ -0.86
PTCH1-218ENST00000548945 FYTTD1Q96QD9 318 aaKnown RBP9.65□□□□□ -0.86
PTCH1-218ENST00000548945 TMEM213A2RRL7 107 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 HMX3A6NHT5 357 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 SCGNO76038 276 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 HLA-AP01891 365 aaKnown RBP9.64□□□□□ -0.87
PTCH1-218ENST00000548945 EIF4EP06730 217 aaKnown RBP9.64□□□□□ -0.87
PTCH1-218ENST00000548945 ELK1P19419 428 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 PPP5CP53041 499 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 RPL30P62888 115 aaKnown RBP9.64□□□□□ -0.87
PTCH1-218ENST00000548945 EIF4EBP1Q13541 118 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-218ENST00000548945 TMEM61Q8N0U2 210 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 VKORC1L1Q8N0U8 176 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 MARC2Q969Z3 335 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 EEF1AKMT3Q96AZ1 226 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 AIFM2Q9BRQ8 373 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 ST6GALNAC5Q9BVH7 336 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 GGTLC1Q9BX51 225 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 ATG5Q9H1Y0 275 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 RHBDL2Q9NX52 303 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 RABL2AQ9UBK7 228 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-218ENST00000548945 EXTL2Q9UBQ6 330 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 RABL2BQ9UNT1 228 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 V9GYH0 126 aa9.64□□□□□ -0.87
PTCH1-218ENST00000548945 TRBV7-1A0A0A6YYK4 115 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 TRAV25A0A0B4J276 109 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 FABP12A6NFH5 140 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 NDUFB8O95169 186 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 HRASP01112 189 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 CTRB1P17538 263 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 EDN2P20800 178 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 NFYAP23511 347 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-218ENST00000548945 PSMB6P28072 239 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 MSMO1Q15800 293 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 OR2B11Q5JQS5 317 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 CTRB2Q6GPI1 263 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 CLEC19AQ6UXS0 136 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 ZNF66Q6ZN08 573 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 OR52B4Q8NGK2 314 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 TCTEX1D2Q8WW35 142 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 SLC25A38Q96DW6 304 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 CXorf58Q96LI9 332 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 ELF5Q9UKW6 265 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-218ENST00000548945 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
PTCH1-218ENST00000548945 LOC102724200A0A096LPH7 203 aaPredicted RBP9.62□□□□□ -0.87
PTCH1-218ENST00000548945 IGKV1D-13A0A0B4J2D9 117 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 A0A1B0GW64 132 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 E7EUB6 86 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 J3QRK9 145 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 IGKV1-13P0DP09 117 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 AREGP15514 252 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 BRWD1-AS2P59051 145 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 RPL8P62917 257 aaKnown RBP9.62□□□□□ -0.87
PTCH1-218ENST00000548945 IL18Q14116 193 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 UXS1Q8NBZ7 420 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 OR4A5Q8NH83 315 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 CACNG8Q8WXS5 425 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 LINC00476Q8WZB0 136 aa9.62□□□□□ -0.87
PTCH1-218ENST00000548945 S100A16Q96FQ6 103 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms