RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 S4R3C0 116 aa12.14□□□□□ -0.47
DDX54-205ENST00000548786 MARCH11A6NNE9 402 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 LY86O95711 162 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 IGHV3-23P01764 117 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 ZNF735P0CB33 412 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 S100GP29377 79 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 MAS1LP35410 378 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 EXOSC2Q13868 293 aaKnown RBP12.13□□□□□ -0.47
DDX54-205ENST00000548786 SCGB2B2Q4G0G5 96 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 ZNF585BQ52M93 769 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 SLC38A6Q8IZM9 456 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 OR4A5Q8NH83 315 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 SLIRPQ9GZT3 109 aaKnown RBP12.13□□□□□ -0.47
DDX54-205ENST00000548786 RANGRFQ9HD47 186 aaPredicted RBP12.13□□□□□ -0.47
DDX54-205ENST00000548786 SLC2A9Q9NRM0 540 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 COMMD9Q9P000 198 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 NSG2Q9Y328 171 aa12.13□□□□□ -0.47
DDX54-205ENST00000548786 CGB1A6NKQ9 187 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 GABARAPH6UMI1 98 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 RAB3DO95716 219 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 OR2B8PP59922 312 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 LPCAT3Q6P1A2 487 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 MCFD2Q8NI22 146 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 C15orf40Q8WUR7 153 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 USMG5Q96IX5 58 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 HINT2Q9BX68 163 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 COMMD5Q9GZQ3 224 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 PEF1Q9UBV8 284 aaKnown RBP12.12□□□□□ -0.47
DDX54-205ENST00000548786 ZNF257Q9Y2Q1 563 aa12.12□□□□□ -0.47
DDX54-205ENST00000548786 FAM223BA6NKX1 122 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 NPIPB5A8MRT5 1133 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 DEFA4P12838 97 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 SYNJ2BPP57105 145 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 TAS2R19P59542 299 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 POU2AF1Q16633 256 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 C15orf32Q32M92 178 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 STEAP1BQ6NZ63 245 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 ZNF343Q6P1L6 599 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 SLC25A42Q86VD7 318 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 FAM223AQ8IWN6 122 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 TMEM229BQ8NBD8 167 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 OR10W1Q8NGF6 305 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 SMIM4Q8WVI0 70 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 FBXL7Q9UJT9 491 aa12.11□□□□□ -0.47
DDX54-205ENST00000548786 TRBV9A0A0B4J1U6 114 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 PPP5D1E7EU14 171 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 BRI3O95415 125 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 TBPP20226 339 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 ZP3P21754 424 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 PSMB6P28072 239 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 UCP3P55916 312 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 ACSM6Q6P461 480 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 ARRDC1Q8N5I2 433 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 NECAP1Q8NC96 275 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 OR4C12Q96R67 309 aa12.1□□□□□ -0.47
DDX54-205ENST00000548786 TEX50A0A1B0GTY4 177 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 IGLC7A0M8Q6 106 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 TPPPO94811 219 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 NDUFB8O95169 186 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 HLA-AP01891 365 aaKnown RBP12.09□□□□□ -0.47
DDX54-205ENST00000548786 CD74P04233 296 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 TNFSF8P32971 234 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 PIGPP57054 158 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 RPEL1Q2QD12 228 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 ZNF429Q86V71 674 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 LHFPL1Q86WI0 220 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 OR13C8Q8NGS7 320 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 MARCH1Q8TCQ1 289 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 MRGPRFQ96AM1 343 aa12.09□□□□□ -0.47
DDX54-205ENST00000548786 QTRT1Q9BXR0 403 aaKnown RBP12.09□□□□□ -0.47
DDX54-205ENST00000548786 ZMAT5Q9UDW3 170 aaKnown RBP12.09□□□□□ -0.47
DDX54-205ENST00000548786 ZNF256Q9Y2P7 627 aaPredicted RBP12.09□□□□□ -0.47
DDX54-205ENST00000548786 FABP12A6NFH5 140 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 DBX1A6NMT0 343 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 BMPR1BO00238 502 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 SNAPC5O75971 98 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 IGKV1-39P01597 117 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 IGKV1D-39P04432 117 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 SERPINE2P07093 398 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 CTRB1P17538 263 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 INSL3P51460 131 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 MRPS10P82664 201 aaKnown RBP12.08□□□□□ -0.48
DDX54-205ENST00000548786 CTRB2Q6GPI1 263 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 OR4C16Q8NGL9 310 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 TERB2Q8NHR7 220 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 FANCD2OSQ96PS1 177 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 OR51B2Q9Y5P1 312 aa12.08□□□□□ -0.48
DDX54-205ENST00000548786 DHFRP00374 187 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 CRYGCP07315 174 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 TRAPPC2P0DI81 140 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 TRAPPC2BP0DI82 140 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 OR13C7P0DN81 318 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 SPNP16150 400 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 MECP2P51608 486 aaKnown RBP12.07□□□□□ -0.48
DDX54-205ENST00000548786 COL7A1Q02388 2944 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 KLF5Q13887 457 aaPredicted RBP12.07□□□□□ -0.48
DDX54-205ENST00000548786 IZUMO4Q1ZYL8 232 aa12.07□□□□□ -0.48
DDX54-205ENST00000548786 SP6Q3SY56 376 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms