RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 MMDQ15546 238 aa10.9□□□□□ -0.67
PTCH1-212ENST00000546744 CCDC144NLQ6NUI1 221 aa10.9□□□□□ -0.67
PTCH1-212ENST00000546744 SMPXQ9UHP9 88 aa10.9□□□□□ -0.67
PTCH1-212ENST00000546744 PEX7O00628 323 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 PPBPP02775 128 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 SCGB1A1P11684 91 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 LGALS3P17931 250 aaKnown RBP10.89□□□□□ -0.67
PTCH1-212ENST00000546744 ADIPOQQ15848 244 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 TMEM78Q5T7P6 136 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 CIARTQ8N365 385 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-212ENST00000546744 C10orf126Q8N4M7 172 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 GPR82Q96P67 336 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 UCN2Q96RP3 112 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 ZNF703Q9H7S9 590 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-212ENST00000546744 SCN3AQ9NY46 2000 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 LDLRAD4O15165 306 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 EAF1Q96JC9 268 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-212ENST00000546744 DOCK6Q96HP0 2047 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 PGPEP1LA6NFU8 196 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 C1QTNF9P0C862 333 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 CCL11P51671 97 aa10.89□□□□□ -0.67
PTCH1-212ENST00000546744 CD5LO43866 347 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 ADCYAP1P18509 176 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 C2orf83Q53S99 150 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 FAM166AQ6J272 317 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 SCARF2Q96GP6 870 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-212ENST00000546744 RABAC1Q9UI14 185 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 INSIG2Q9Y5U4 225 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 A0A0J9YW62 118 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 LINC00271P0C7V0 271 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 GNB2P62879 340 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 ZNF841Q6ZN19 808 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 ORMDL3Q8N138 153 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 SPANXDQ9BXN6 97 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 A0A1B0GWJ7 208 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 NPIPB6E9PJ23 425 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 RAB1CQ92928 201 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 TMEM54Q969K7 222 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 PRELID3AQ96N28 172 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 GREB1Q4ZG55 1949 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 CCL2P13500 99 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 C16orf47Q6ZP98 133 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-212ENST00000546744 ANAPC13Q9BS18 74 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 WDR83OSQ9Y284 106 aa10.88□□□□□ -0.67
PTCH1-212ENST00000546744 SCO2A0A1W2PP80 73 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 APOHP02749 345 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-212ENST00000546744 OTX1P32242 354 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-212ENST00000546744 TIMP3P35625 211 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 WFDC8Q8IUA0 241 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 TUSC5Q8IXB3 177 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 GFI1Q99684 422 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 UCP2P55851 309 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 GFI1BQ5VTD9 330 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 TMEM144Q7Z5S9 345 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 LINC00470Q9BZP3 86 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 COX11Q9Y6N1 276 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 DNAH12Q6ZR08 3092 aa10.87□□□□□ -0.67
PTCH1-212ENST00000546744 A0A1W2PPE3 182 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 ATP5G3P48201 142 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-212ENST00000546744 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-212ENST00000546744 F11RQ9Y624 299 aaKnown RBP10.86□□□□□ -0.67
PTCH1-212ENST00000546744 TPRP12270 2363 aaKnown RBP10.86□□□□□ -0.67
PTCH1-212ENST00000546744 ALPK2Q86TB3 2170 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 IGKV3-11P04433 115 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 OSR1Q8TAX0 266 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-212ENST00000546744 hCG_38984A0A1B0GV85 526 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 PPIAL4DF5H284 164 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 C3orf80F5H4A9 247 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 PTCRAQ6ISU1 281 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-212ENST00000546744 MESP1Q9BRJ9 268 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 DOCK4Q8N1I0 1966 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 ATG2BQ96BY7 2078 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 LYPD3O95274 346 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 CCL3P10147 92 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 ANOS1P23352 680 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 PLA2G2FQ9BZM2 168 aa10.86□□□□□ -0.67
PTCH1-212ENST00000546744 PLXNA3P51805 1871 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 EPOPA6NHQ4 379 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 EGR1P18146 543 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 Q0VG73 95 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 OR4C13Q8NGP0 309 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 RPP25Q9BUL9 199 aaKnown RBP10.85□□□□□ -0.67
PTCH1-212ENST00000546744 HBDP02042 147 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 NBEAP1P0C6P0 100 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 ESDP10768 282 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 FOXA3P55318 350 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-212ENST00000546744 ERVK11-1P61568 191 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 OR4A5Q8NH83 315 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 GP6Q9HCN6 339 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 TMSB15BA0A087X1C1 80 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 C4orf51C9J302 202 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 E9PQ18 207 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 SSTR5P35346 364 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 TFPI2P48307 235 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 PCSK4Q6UW60 755 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 LINC01551Q86U37 167 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 FAM19A2Q8N3H0 131 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 SYT8Q8NBV8 401 aa10.85□□□□□ -0.67
PTCH1-212ENST00000546744 IFI27L2Q9H2X8 130 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms