RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 COA4Q9NYJ1 87 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 KLK9Q9UKQ9 250 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 ZNF257Q9Y2Q1 563 aa9.16□□□□□ -0.94
YBX3-217ENST00000546164 TRBV9A0A0B4J1U6 114 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 C13orf42A0A1B0GVH6 325 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 A0A1B0GW64 132 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 FAM223BA6NKX1 122 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 MARCH11A6NNE9 402 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 NPIPB5A8MRT5 1133 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 SEC14L6B5MCN3 397 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 E7EUB6 86 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 ZNF701M0R085 212 aaPredicted RBP9.15□□□□□ -0.94
YBX3-217ENST00000546164 UPK2O00526 184 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 CRYGCP07315 174 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 APELAP0DMC3 54 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 PTBP1P26599 531 aaKnown RBP eCLIP9.15□□□□□ -0.94
YBX3-217ENST00000546164 HOXD3P31249 432 aaPredicted RBP9.15□□□□□ -0.94
YBX3-217ENST00000546164 INSL3P51460 131 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 RND3P61587 244 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 ZNF585BQ52M93 769 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 PHLDA2Q53GA4 152 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 ZNF343Q6P1L6 599 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 FAM223AQ8IWN6 122 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 DCUN1D4Q92564 292 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 ZNF486Q96H40 463 aaPredicted RBP9.15□□□□□ -0.94
YBX3-217ENST00000546164 SRSF8Q9BRL6 282 aaKnown RBP9.15□□□□□ -0.94
YBX3-217ENST00000546164 RANGRFQ9HD47 186 aaPredicted RBP9.15□□□□□ -0.94
YBX3-217ENST00000546164 HRASLSQ9HDD0 168 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 TMEM140Q9NV12 185 aa9.15□□□□□ -0.94
YBX3-217ENST00000546164 TRAV3A0A0B4J244 114 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 HMX3A6NHT5 357 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 OVOL1O14753 267 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 GSTZ1O43708 216 aaPredicted RBP9.14□□□□□ -0.95
YBX3-217ENST00000546164 RBMXL2O75526 392 aaKnown RBP9.14□□□□□ -0.95
YBX3-217ENST00000546164 RAB3DO95716 219 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 TNFSF8P32971 234 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 LPAR6P43657 344 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 SLURP1P55000 103 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 OR2B8PP59922 312 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 ERVK-16P61578 105 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 ZNF45Q02386 682 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 IL18Q14116 193 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 THOC7Q6I9Y2 204 aaKnown RBP9.14□□□□□ -0.95
YBX3-217ENST00000546164 STEAP1BQ6NZ63 245 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 TBC1D26Q86UD7 250 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 DMBX1Q8NFW5 382 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 OR4D10Q8NGI6 311 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 TERB2Q8NHR7 220 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 MCFD2Q8NI22 146 aa9.14□□□□□ -0.95
YBX3-217ENST00000546164 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
YBX3-217ENST00000546164 RSL24D1Q9UHA3 163 aaKnown RBP9.14□□□□□ -0.95
YBX3-217ENST00000546164 CGB1A6NKQ9 187 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 K7EIL1 84 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 CTRB1P17538 263 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 ZP3P21754 424 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 PSMB6P28072 239 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 RHOGP84095 191 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 MEF2DQ14814 521 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 CTRB2Q6GPI1 263 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 NECAP1Q8NC96 275 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 MRAPQ8TCY5 172 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 FYTTD1Q96QD9 318 aaKnown RBP9.13□□□□□ -0.95
YBX3-217ENST00000546164 COMMD5Q9GZQ3 224 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 AKIP1Q9NQ31 210 aa9.13□□□□□ -0.95
YBX3-217ENST00000546164 IGLC7A0M8Q6 106 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 DPPA5A6NC42 116 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 FABP12A6NFH5 140 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 CCDC160A6NGH7 325 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 DHFRP00374 187 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 KRASP01116 189 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 PRH1P02810 166 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 MYOD1P15172 320 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 AREGP15514 252 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 RPA2P15927 270 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 ECI1P42126 302 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 FAM209BQ5JX69 171 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 ZNF429Q86V71 674 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 MRGPRFQ96AM1 343 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 FANCD2OSQ96PS1 177 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 TSC22D3Q99576 134 aa9.12□□□□□ -0.95
YBX3-217ENST00000546164 QTRT1Q9BXR0 403 aaKnown RBP9.12□□□□□ -0.95
YBX3-217ENST00000546164 PEF1Q9UBV8 284 aaKnown RBP9.12□□□□□ -0.95
YBX3-217ENST00000546164 WI2-2373I1.2A0A1W2PRP0 233 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 H0Y980 276 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 CTSDP07339 412 aaPredicted RBP9.11□□□□□ -0.95
YBX3-217ENST00000546164 AKAIN1P0CW23 69 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 PGAM2P15259 253 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 HIST1H1BP16401 226 aaKnown RBP9.11□□□□□ -0.95
YBX3-217ENST00000546164 G6PCP35575 357 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 PIGPP57054 158 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 DEFA5Q01523 94 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 ATP5G2Q06055 141 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 KLF5Q13887 457 aaPredicted RBP9.11□□□□□ -0.95
YBX3-217ENST00000546164 SURF2Q15527 256 aaPredicted RBP9.11□□□□□ -0.95
YBX3-217ENST00000546164 ACSM6Q6P461 480 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 HSD17B13Q7Z5P4 300 aaPredicted RBP9.11□□□□□ -0.95
YBX3-217ENST00000546164 OR1L8Q8NGR8 309 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 ZFAND1Q8TCF1 268 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 SEC22AQ96IW7 307 aa9.11□□□□□ -0.95
YBX3-217ENST00000546164 SLC2A8Q9NY64 477 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms