RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 OR5AP2Q8NGF4 316 aa9.93□□□□□ -0.82
RTN3-213ENST00000543552 OR5H6Q8NGV6 325 aa9.93□□□□□ -0.82
RTN3-213ENST00000543552 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
RTN3-213ENST00000543552 GIMAP1Q8WWP7 306 aa9.93□□□□□ -0.82
RTN3-213ENST00000543552 S100A16Q96FQ6 103 aaKnown RBP9.93□□□□□ -0.82
RTN3-213ENST00000543552 PLEKHA3Q9HB20 300 aa9.93□□□□□ -0.82
RTN3-213ENST00000543552 VCX3AQ9NNX9 186 aa9.93□□□□□ -0.82
RTN3-213ENST00000543552 ZC4H2Q9NQZ6 224 aa9.93□□□□□ -0.82
RTN3-213ENST00000543552 KLK9Q9UKQ9 250 aa9.93□□□□□ -0.82
RTN3-213ENST00000543552 RYR2Q92736 4967 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 ZNF320A2RRD8 509 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 A8MWP6 167 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 SULT1C2O00338 296 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 OR2C1O95371 312 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 BRWD1-AS2P59051 145 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 ERVK-16P61578 105 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 POU2AF1Q16633 256 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 ANKRD55Q3KP44 614 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 AADACL3Q5VUY0 350 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 ZFAND6Q6FIF0 208 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 CLEC19AQ6UXS0 136 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 HSD17B13Q7Z5P4 300 aaPredicted RBP9.92□□□□□ -0.82
RTN3-213ENST00000543552 TMEM17Q86X19 198 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 DMBX1Q8NFW5 382 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 CCDC140Q96MF4 163 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 FANCD2OSQ96PS1 177 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 PLEKHA2Q9HB19 425 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 COMMD9Q9P000 198 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 STARD9Q9P2P6 4700 aa9.92□□□□□ -0.82
RTN3-213ENST00000543552 IGLV11-55A0A075B6I3 123 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 XRCC3O43542 346 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 NDUFB8O95169 186 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 HLA-AP01891 365 aaKnown RBP9.91□□□□□ -0.82
RTN3-213ENST00000543552 CBLN1P23435 193 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 TAS2R46P59540 309 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 OR2B8PP59922 312 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 UBE2NLQ5JXB2 153 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 ZNF57Q68EA5 555 aaPredicted RBP9.91□□□□□ -0.82
RTN3-213ENST00000543552 ADAMTSL5Q6ZMM2 481 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 CMTM1Q8IZ96 169 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 OR51H1Q8NH63 302 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 MARC2Q969Z3 335 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 GPHA2Q96T91 129 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 QTRT1Q9BXR0 403 aaKnown RBP9.91□□□□□ -0.82
RTN3-213ENST00000543552 RNF167Q9H6Y7 350 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 TMEM140Q9NV12 185 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 EHFQ9NZC4 300 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 DMRT1Q9Y5R6 373 aa9.91□□□□□ -0.82
RTN3-213ENST00000543552 LCE6AA0A183 80 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 A0A1B0GW64 132 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 ZNF785A8K8V0 405 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 OR11H12B2RN74 326 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 E7EUB6 86 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 UPK2O00526 184 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 IGHV3-23P01764 117 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 REG1AP05451 166 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 PTHLHP12272 177 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 TMEM69Q5SWH9 247 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 ZNF818PQ6ZRF7 136 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 C19orf35Q6ZS72 473 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 SRD5A3Q9H8P0 318 aa9.9□□□□□ -0.82
RTN3-213ENST00000543552 TENM2Q9NT68 2774 aa9.9□□□□□ -0.83
RTN3-213ENST00000543552 SACSQ9NZJ4 4579 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 IGLC7A0M8Q6 106 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 TMEM213A2RRL7 107 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 CLEC3BP05452 202 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 FCER2P06734 321 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 CD7P09564 240 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 MYOD1P15172 320 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 S100GP29377 79 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 LINC00322Q6ZN03 302 aaPredicted RBP9.89□□□□□ -0.83
RTN3-213ENST00000543552 DEFB125Q8N687 156 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 GDPD1Q8N9F7 314 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 TSPAN14Q8NG11 270 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 OR52B4Q8NGK2 314 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 OR5H2Q8NGV7 314 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 WDR89Q96FK6 387 aaPredicted RBP9.89□□□□□ -0.83
RTN3-213ENST00000543552 HIPK2Q9H2X6 1198 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 UFC1Q9Y3C8 167 aa9.89□□□□□ -0.83
RTN3-213ENST00000543552 TRAV25A0A0B4J276 109 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 MEIS3P1A6NDR6 274 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 MFSD2BA6NFX1 497 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 MARCH11A6NNE9 402 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 S1PR2O95136 353 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 TRAPPC2P0DI81 140 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 TRAPPC2BP0DI82 140 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 F2RP25116 425 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 PTBP1P26599 531 aaKnown RBP eCLIP9.88□□□□□ -0.835e-7■■■□□ 14.7
RTN3-213ENST00000543552 GPR183P32249 361 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 ELLP55199 621 aaPredicted RBP9.88□□□□□ -0.83
RTN3-213ENST00000543552 PLET1Q6UQ28 207 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 DHRS11Q6UWP2 260 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 RBPMS2Q6ZRY4 209 aaKnown RBP9.88□□□□□ -0.83
RTN3-213ENST00000543552 TMEM61Q8N0U2 210 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 CADM3Q8N126 398 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 SAMD12Q8N8I0 201 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 UXS1Q8NBZ7 420 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 OR1L8Q8NGR8 309 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 ZNF502Q8TBZ5 544 aa9.88□□□□□ -0.83
RTN3-213ENST00000543552 VN1R17PQ8TDU5 208 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms