RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 RNF7Q9UBF6 113 aa11.72□□□□□ -0.53
RPS6KC1-206ENST00000543354 FBLN5Q9UBX5 448 aa11.72□□□□□ -0.53
RPS6KC1-206ENST00000543354 ITLN1Q8WWA0 313 aa11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 C18orf12Q96KH6 178 aa11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 ZNF71Q9NQZ8 489 aaPredicted RBP11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 PTPN13Q12923 2485 aa11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 GAGE10A6NGK3 116 aa11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 FAM90A26D6RGX4 464 aa11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 GNG7O60262 68 aa11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 MAS1LP35410 378 aa11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 JOSD1Q15040 202 aaPredicted RBP11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 PMCHL2Q9BQD1 86 aa11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 DEPPQ9NTK1 212 aa11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 ZGRF1Q86YA3 2104 aa11.71□□□□□ -0.53
RPS6KC1-206ENST00000543354 IGHV3-35A0A0C4DH35 117 aa11.71□□□□□ -0.54
RPS6KC1-206ENST00000543354 FOXG1P55316 489 aaPredicted RBP11.71□□□□□ -0.54
RPS6KC1-206ENST00000543354 HSPE1P61604 102 aaKnown RBP11.71□□□□□ -0.54
RPS6KC1-206ENST00000543354 ZCCHC14Q8WYQ9 949 aaKnown RBP11.71□□□□□ -0.54
RPS6KC1-206ENST00000543354 EAF1Q96JC9 268 aaPredicted RBP11.71□□□□□ -0.54
RPS6KC1-206ENST00000543354 INSIG2Q9Y5U4 225 aa11.71□□□□□ -0.54
RPS6KC1-206ENST00000543354 RAMP3O60896 148 aa11.71□□□□□ -0.54
RPS6KC1-206ENST00000543354 GPR6P46095 362 aaPredicted RBP11.71□□□□□ -0.54
RPS6KC1-206ENST00000543354 TMEM108Q6UXF1 575 aa11.71□□□□□ -0.54
RPS6KC1-206ENST00000543354 NOTCH4Q99466 2003 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 MUC21A0A0G2JKD1 596 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 MUC21A0A140T8X8 626 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 TMEM177Q53S58 311 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 MUC21Q5SSG8 566 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 C1QL4Q86Z23 238 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 NPIPB3Q92617 1050 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 TMEM54Q969K7 222 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 WDYHV1Q96HA8 205 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 WDR90Q96KV7 1748 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 RASL11BQ9BPW5 248 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 SLC25A17O43808 307 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 HOXB1P14653 301 aaPredicted RBP11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 INO80CQ6PI98 192 aaPredicted RBP11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 TMEM116Q8NCL8 245 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 DEFB124Q8NES8 71 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 ZNF524Q96C55 264 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 RNASE7Q9H1E1 156 aaKnown RBP11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 ACACBO00763 2458 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 PLXNA4Q9HCM2 1894 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 OR4C46A6NHA9 309 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 F5H697 171 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 EFEMP2O95967 443 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 PEAR1Q5VY43 1037 aaPredicted RBP11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 LEMD1Q68G75 181 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 BHLHA15Q7RTS1 189 aaPredicted RBP11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 UBALD2Q8IYN6 164 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 PERPQ96FX8 193 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 TMEM56-RWDD3S4R434 201 aa11.7□□□□□ -0.54
RPS6KC1-206ENST00000543354 NLRC5Q86WI3 1866 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 IGKV1-27A0A075B6S5 117 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 CSRP2Q16527 193 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 GFRALQ6UXV0 394 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 TMEM256Q8N2U0 113 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 GMPPAQ96IJ6 420 aaPredicted RBP11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 RBM14Q96PK6 669 aaKnown RBP11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 CA2P00918 260 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 RPL7P18124 248 aaKnown RBP11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 RIGQ13278 110 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 OR5P3Q8WZ94 311 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 OPN3Q9H1Y3 402 aaPredicted RBP11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 F11RQ9Y624 299 aaKnown RBP11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 DYSFO75923 2080 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 NUDT3O95989 172 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 C8orf88P0DMB2 117 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 IGFBP2P18065 325 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 SCGB1D4Q6XE38 83 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 FAM214BQ7L5A3 538 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 RPP25LQ8N5L8 163 aaKnown RBP11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 OR4D5Q8NGN0 318 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 PLPPR1Q8TBJ4 325 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 REPIN1Q9BWE0 567 aaKnown RBP11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 PKIBQ9C010 78 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 MS4A5Q9H3V2 200 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 CALYQ9NYX4 217 aa11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 YLPM1P49750 1951 aaKnown RBP11.69□□□□□ -0.54
RPS6KC1-206ENST00000543354 MKRN2OSH3BPM6 223 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 PPIHO43447 177 aaKnown RBP11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 HYPMO75409 117 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 SLC25A34Q6PIV7 304 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 C1orf210Q8IVY1 113 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 CSPG4Q6UVK1 2322 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 PLXNB1O43157 2135 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 VENTXO95231 258 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 CA1P00915 261 aaPredicted RBP11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 ACP1P24666 158 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 CFHR1Q03591 330 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 PMCHL1Q16048 86 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 NFAM1Q8NET5 270 aaPredicted RBP11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 TMEM45BQ96B21 275 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 TXNDC17Q9BRA2 123 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 DERL1Q9BUN8 251 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 HSPB8Q9UJY1 196 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 MALRD1Q5VYJ5 2156 aa11.68□□□□□ -0.54
RPS6KC1-206ENST00000543354 TMEM210A6NLX4 147 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms