RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 CRYBB3P26998 211 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 TDHQ8IZJ6 230 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 GCHFRP30047 84 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 GREB1LQ9C091 1923 aaPredicted RBP16.63■□□□□ 0.25
HDAC4-215ENST00000543185 RTN4RQ9BZR6 473 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 ZNF124Q15973 351 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 CHCHD1Q96BP2 118 aaKnown RBP16.63■□□□□ 0.25
HDAC4-215ENST00000543185 IZUMO1RA6ND01 250 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 OR2H2O95918 312 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 IFITM2Q01629 132 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 MBD1Q9UIS9 605 aaPredicted RBP16.63■□□□□ 0.25
HDAC4-215ENST00000543185 ADAMTS7Q9UKP4 1686 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 SSTR5P35346 364 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 GNB1LQ9BYB4 327 aa16.63■□□□□ 0.25
HDAC4-215ENST00000543185 WNT10AQ9GZT5 417 aa16.62■□□□□ 0.25
HDAC4-215ENST00000543185 RPP21Q9H633 154 aaKnown RBP16.62■□□□□ 0.25
HDAC4-215ENST00000543185 ACSF3Q4G176 576 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-215ENST00000543185 C14orf144Q96I85 54 aa16.62■□□□□ 0.25
HDAC4-215ENST00000543185 PPBPP02775 128 aa16.62■□□□□ 0.25
HDAC4-215ENST00000543185 C1QL4Q86Z23 238 aa16.62■□□□□ 0.25
HDAC4-215ENST00000543185 SPAG8Q99932 426 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-215ENST00000543185 TRAV9-2A0A087WT02 112 aa16.62■□□□□ 0.25
HDAC4-215ENST00000543185 RNF182Q8N6D2 247 aa16.62■□□□□ 0.25
HDAC4-215ENST00000543185 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-215ENST00000543185 APELAP0DMC3 54 aa16.62■□□□□ 0.25
HDAC4-215ENST00000543185 C16orf97H3BN30 126 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 MDKP21741 143 aaPredicted RBP16.61■□□□□ 0.25
HDAC4-215ENST00000543185 JPT1Q9UK76 154 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 PPIAL4EA0A075B759 164 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 PPIAL4DF5H284 164 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 PPIAL4FP0DN26 164 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 SCGB3A1Q96QR1 104 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 PPIAL4AQ9Y536 164 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 CKS1BP61024 79 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 TMEM187Q14656 261 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 PLAC1Q9HBJ0 212 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 RLFQ13129 1914 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 MED13LQ71F56 2210 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 TRBV23-1A0A0A0MS06 115 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 CEACAM4O75871 244 aa16.61■□□□□ 0.25
HDAC4-215ENST00000543185 SRSF4Q08170 494 aaKnown RBP16.61■□□□□ 0.25
HDAC4-215ENST00000543185 TANC2Q9HCD6 1990 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 SYNGR3O43761 229 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 C1QAP02745 245 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 CACNG7P62955 275 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 S100A7L2Q5SY68 101 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 GOLT1AQ6ZVE7 132 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 TMEM186Q96B77 213 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 KBTBD11-OT1A0A1B0GTJ5 212 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 A0A1W2PP11 408 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 MEX3AA1L020 520 aaKnown RBP16.6■□□□□ 0.25
HDAC4-215ENST00000543185 OR9G4Q8NGQ1 327 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 NXT2Q9NPJ8 142 aaKnown RBP16.6■□□□□ 0.25
HDAC4-215ENST00000543185 GUSBP11Q6P575 273 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 FAM90A27PA6NNH2 459 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 CXorf66Q5JRM2 361 aaPredicted RBP16.6■□□□□ 0.25
HDAC4-215ENST00000543185 TMEM240Q5SV17 173 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 C9orf40Q8IXQ3 194 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 PNKDQ8N490 385 aa16.6■□□□□ 0.25
HDAC4-215ENST00000543185 GFRA1P56159 465 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 FUT5Q11128 374 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 LINC00305Q7Z4B0 112 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 APOBEC4Q8WW27 367 aaKnown RBP16.59■□□□□ 0.25
HDAC4-215ENST00000543185 EEF1AKMT3Q96AZ1 226 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 TRAV8-4A0A0B4J246 113 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 HYAL3O43820 417 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-215ENST00000543185 CISD3P0C7P0 127 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 PATE4P0C8F1 98 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 CACNG8Q8WXS5 425 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 SMPXQ9UHP9 88 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 TRBV7-9A0A0J9YWB2 115 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 SIP14410 1827 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 PHLDA1Q8WV24 401 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-215ENST00000543185 TNFRSF18Q9Y5U5 241 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 hCG_38984A0A1B0GV85 526 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 NKX2-8O15522 239 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 APOHP02749 345 aaPredicted RBP16.59■□□□□ 0.25
HDAC4-215ENST00000543185 SCTP09683 121 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 MAGEA5P43359 124 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 NABP2Q9BQ15 211 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 KLK15Q9H2R5 256 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 IGKV3-7A0A075B6H7 116 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 HIGD1CA8MV81 97 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 OR11H4Q8NGC9 324 aa16.59■□□□□ 0.25
HDAC4-215ENST00000543185 PEX7O00628 323 aa16.58■□□□□ 0.25
HDAC4-215ENST00000543185 RND2P52198 227 aa16.58■□□□□ 0.25
HDAC4-215ENST00000543185 TMEM95Q3KNT9 176 aa16.58■□□□□ 0.25
HDAC4-215ENST00000543185 ATP5L2Q7Z4Y8 100 aa16.58■□□□□ 0.25
HDAC4-215ENST00000543185 TMEM170AQ8WVE7 144 aa16.58■□□□□ 0.25
HDAC4-215ENST00000543185 ARRDC1-AS1Q9H2J1 176 aa16.58■□□□□ 0.25
HDAC4-215ENST00000543185 TMEM106BQ9NUM4 274 aa16.58■□□□□ 0.25
HDAC4-215ENST00000543185 CYSLTR1Q9Y271 337 aa16.58■□□□□ 0.25
HDAC4-215ENST00000543185 FRMPD3Q5JV73 1810 aa16.58■□□□□ 0.25
HDAC4-215ENST00000543185 ATP5G2Q06055 141 aa16.58■□□□□ 0.24
HDAC4-215ENST00000543185 HOXB3P14651 431 aaPredicted RBP16.58■□□□□ 0.24
HDAC4-215ENST00000543185 GAGE13Q4V321 117 aa16.58■□□□□ 0.24
HDAC4-215ENST00000543185 C1QL3Q5VWW1 255 aa16.58■□□□□ 0.24
HDAC4-215ENST00000543185 ZNF721Q8TF20 911 aa16.58■□□□□ 0.24
HDAC4-215ENST00000543185 SLC25A38Q96DW6 304 aa16.58■□□□□ 0.24
HDAC4-215ENST00000543185 SDF2L1Q9HCN8 221 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms