RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 TSC22D3Q99576 134 aa11.05□□□□□ -0.64
DDX11-221ENST00000542661 COMMD5Q9GZQ3 224 aa11.05□□□□□ -0.64
DDX11-221ENST00000542661 ZNF355PQ9NSJ1 428 aa11.05□□□□□ -0.64
DDX11-221ENST00000542661 GPR132Q9UNW8 380 aa11.05□□□□□ -0.64
DDX11-221ENST00000542661 A0A0G2JLM5 398 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 SNAPC5O75971 98 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 OR9G9P0C7N8 305 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 G6PCP35575 357 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 MYCNOSP40205 109 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 TPPP2P59282 170 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 RUNX1Q01196 453 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 KIAA0141Q14154 515 aaPredicted RBP11.04□□□□□ -0.64
DDX11-221ENST00000542661 CNPY1Q3B7I2 92 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 ASPHD1Q5U4P2 390 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 MS4A10Q96PG2 267 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 RTBDNQ9BSG5 229 aaPredicted RBP11.04□□□□□ -0.64
DDX11-221ENST00000542661 COA4Q9NYJ1 87 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 FKBP11Q9NYL4 201 aa11.04□□□□□ -0.64
DDX11-221ENST00000542661 TEX13DA0A0J9YY54 714 aaPredicted RBP11.03□□□□□ -0.64
DDX11-221ENST00000542661 CCL24O00175 119 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 TRGV3P03979 118 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 C10orf55Q5SWW7 151 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 THOC7Q6I9Y2 204 aaKnown RBP11.03□□□□□ -0.64
DDX11-221ENST00000542661 C18orf65Q6ZTR6 163 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 H2BFWTQ7Z2G1 175 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 TTC9CQ8N5M4 171 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 ADAD2Q8NCV1 583 aaKnown RBP11.03□□□□□ -0.64
DDX11-221ENST00000542661 WFDC9Q8NEX5 89 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 SEC22AQ96IW7 307 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 FYTTD1Q96QD9 318 aaKnown RBP11.03□□□□□ -0.64
DDX11-221ENST00000542661 TP53RKQ96S44 253 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 SLC25A21Q9BQT8 299 aaPredicted RBP11.03□□□□□ -0.64
DDX11-221ENST00000542661 SRSF8Q9BRL6 282 aaKnown RBP11.03□□□□□ -0.64
DDX11-221ENST00000542661 C5orf66Q9H5L9 145 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 NAA60Q9H7X0 242 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 PRNDQ9UKY0 176 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 ZNF257Q9Y2Q1 563 aa11.03□□□□□ -0.64
DDX11-221ENST00000542661 TRAV3A0A0B4J244 114 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 C13orf42A0A1B0GVH6 325 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 NAP1L6A6NFF2 107 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 NPIPB5A8MRT5 1133 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 TEX22C9J3V5 150 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 DHFRP00374 187 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 APELAP0DMC3 54 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 CD33P20138 364 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 OR2B8PP59922 312 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 DHODHQ02127 395 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 BAK1Q16611 211 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 TRIM16LQ309B1 348 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 HSD17B13Q7Z5P4 300 aaPredicted RBP11.02□□□□□ -0.65
DDX11-221ENST00000542661 SGPP2Q8IWX5 399 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 OR1L8Q8NGR8 309 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 CASTOR1Q8WTX7 329 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 RAX2Q96IS3 184 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 USMG5Q96IX5 58 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 P2RX4Q99571 388 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 QTRT1Q9BXR0 403 aaKnown RBP11.02□□□□□ -0.65
DDX11-221ENST00000542661 TMEM222Q9H0R3 208 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 GNB4Q9HAV0 340 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 KCNIP3Q9Y2W7 256 aa11.02□□□□□ -0.65
DDX11-221ENST00000542661 CRYM-AS1A6NIL9 109 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 CENPXA8MT69 81 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 I3L521 148 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 IGKV1-39P01597 117 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 IGKV1D-39P04432 117 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 LGALS1P09382 135 aaKnown RBP11.01□□□□□ -0.65
DDX11-221ENST00000542661 UCP1P25874 307 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 ETV3LQ6ZN32 361 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 MRPL41Q8IXM3 137 aaKnown RBP11.01□□□□□ -0.65
DDX11-221ENST00000542661 LINC00482Q8N8I6 264 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 OR5B3Q8NH48 314 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 OR4A16Q8NH70 328 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 S100ZQ8WXG8 99 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 PTTG2Q9NZH5 202 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 OR51B2Q9Y5P1 312 aa11.01□□□□□ -0.65
DDX11-221ENST00000542661 PIGBOS1A0A0B4J2F0 54 aa11□□□□□ -0.65
DDX11-221ENST00000542661 TEX50A0A1B0GTY4 177 aa11□□□□□ -0.65
DDX11-221ENST00000542661 HMX3A6NHT5 357 aa11□□□□□ -0.65
DDX11-221ENST00000542661 FAM223BA6NKX1 122 aa11□□□□□ -0.65
DDX11-221ENST00000542661 E7EUB6 86 aa11□□□□□ -0.65
DDX11-221ENST00000542661 CYB5BO43169 146 aa11□□□□□ -0.65
DDX11-221ENST00000542661 CDS2O95674 445 aa11□□□□□ -0.65
DDX11-221ENST00000542661 CRYGCP07315 174 aa11□□□□□ -0.65
DDX11-221ENST00000542661 TRAPPC2P0DI81 140 aa11□□□□□ -0.65
DDX11-221ENST00000542661 TRAPPC2BP0DI82 140 aa11□□□□□ -0.65
DDX11-221ENST00000542661 PSMB6P28072 239 aa11□□□□□ -0.65
DDX11-221ENST00000542661 AKR1C2P52895 323 aa11□□□□□ -0.65
DDX11-221ENST00000542661 ZNF616Q08AN1 781 aa11□□□□□ -0.65
DDX11-221ENST00000542661 DEFB136Q30KP8 78 aa11□□□□□ -0.65
DDX11-221ENST00000542661 SP6Q3SY56 376 aa11□□□□□ -0.65
DDX11-221ENST00000542661 FAM223AQ8IWN6 122 aa11□□□□□ -0.65
DDX11-221ENST00000542661 NECAP1Q8NC96 275 aa11□□□□□ -0.65
DDX11-221ENST00000542661 OR11H1Q8NG94 326 aa11□□□□□ -0.65
DDX11-221ENST00000542661 OR1N2Q8NGR9 330 aa11□□□□□ -0.65
DDX11-221ENST00000542661 DPF1Q92782 380 aa11□□□□□ -0.65
DDX11-221ENST00000542661 RRNAD1Q96FB5 475 aaKnown RBP11□□□□□ -0.65
DDX11-221ENST00000542661 RCC1LQ96I51 464 aaKnown RBP11□□□□□ -0.65
DDX11-221ENST00000542661 SDHCQ99643 169 aaPredicted RBP11□□□□□ -0.65
DDX11-221ENST00000542661 C7orf50Q9BRJ6 194 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms