RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 HIST1H2BMQ99879 126 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 GGTLC1Q9BX51 225 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 DOK5Q9P104 306 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 RPUSD1Q9UJJ7 312 aaKnown RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 LSM4Q9Y4Z0 139 aaKnown RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 ZNF292O60281 2723 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 RAI1Q7Z5J4 1906 aaPredicted RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 DMXL1Q9Y485 3027 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 DSCAMO60469 2012 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 ELOA3CA0A087WX78 387 aaPredicted RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 TRAV3A0A0B4J244 114 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 MKRN2OSH3BPM6 223 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 PHOX2AO14813 284 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 PAGE4O60829 102 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 YIF1AO95070 293 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 HRASP01112 189 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 IL6RP08887 468 aaPredicted RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 NBL1P41271 181 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 OR4A47Q6IF82 309 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 DUX4L9Q6RFH8 374 aaPredicted RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 SLC25A48Q6ZT89 311 aaKnown RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 SLC16A13Q7RTY0 426 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 TGIF2LYQ8IUE0 185 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 VKORC1L1Q8N0U8 176 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 ZNF383Q8NA42 475 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 SLC24A4Q8NFF2 622 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 NANPQ8TBE9 248 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 MGST2Q99735 147 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 MS4A5Q9H3V2 200 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 ZNF257Q9Y2Q1 563 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 LINC00312Q9Y6C7 94 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 DSPP15924 2871 aaKnown RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 DOCK11Q5JSL3 2073 aa5.38□□□□□ -1.55
PTPRO-208ENST00000542557 CNOT1A5YKK6 2376 aaKnown RBP5.38□□□□□ -1.55
PTPRO-208ENST00000542557 hADV38S2A0JD32 116 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 NKX6-3A6NJ46 265 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 C11orf94C9JXX5 98 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 F6UZH7 168 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 PRRG2O14669 202 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 TMPRSS2O15393 492 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 TRGC2P03986 189 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 PFN1P07737 140 aaKnown RBP5.37□□□□□ -1.55
PTPRO-208ENST00000542557 STAG3L2P0CL84 134 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 STAG3L3P0CL85 134 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 TNFRSF1AP19438 455 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 BMP5P22003 454 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 NPY1RP25929 384 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 ATP5IP56385 69 aaPredicted RBP5.37□□□□□ -1.55
PTPRO-208ENST00000542557 MEF2CQ06413 473 aaPredicted RBP5.37□□□□□ -1.55
PTPRO-208ENST00000542557 NCMAPQ5T1S8 102 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 C22orf34Q6ZV56 151 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 C16orf82Q7Z2V1 217 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 LYG1Q8N1E2 194 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 GATAD1Q8WUU5 269 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 LEAP2Q969E1 77 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 SSX3Q99909 188 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 SRD5A3Q9H8P0 318 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 NPVFQ9HCQ7 196 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 PRNDQ9UKY0 176 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 PXMP4Q9Y6I8 212 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 CUL9Q8IWT3 2517 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 A0A1W2PPV4 95 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 C16orf97H3BN30 126 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 H7BYZ3 331 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 IGHV3-7P01780 117 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 GYPAP02724 150 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 CD99P14209 185 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 S100PP25815 95 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 ARL3P36405 182 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 COTL1Q14019 142 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 UTF1Q5T230 341 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 FAM216BQ8N7L0 139 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 OR51G1Q8NGK1 321 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 CCL13Q99616 98 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 JKAMPQ9P055 326 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 TET2Q6N021 2002 aaPredicted RBP5.37□□□□□ -1.55
PTPRO-208ENST00000542557 SVILO95425 2214 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 TRAV38-1A0A0B4J264 116 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 A0A0G2JNJ9 132 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 IFITM10A6NMD0 228 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 C17orf100A8MU93 164 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 CLEC3BP05452 202 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 PLA2G5P39877 138 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 NDUFA6P56556 154 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 RTL8BQ17RB0 113 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 GCSAMLQ5JQS6 135 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 ZNF833PQ6ZTB9 187 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 DOLPP1Q86YN1 238 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 ABHD12Q8N2K0 398 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 ZCCHC14Q8WYQ9 949 aaKnown RBP5.37□□□□□ -1.55
PTPRO-208ENST00000542557 OR5B12Q96R08 314 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 OR51M1Q9H341 326 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 GAL3ST2Q9H3Q3 398 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 ENY2Q9NPA8 101 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 Q9UFV3 132 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 CADP27708 2225 aa5.37□□□□□ -1.55
PTPRO-208ENST00000542557 PPP1R2P9O14990 202 aa5.36□□□□□ -1.55
PTPRO-208ENST00000542557 CXorf1O96002 111 aa5.36□□□□□ -1.55
PTPRO-208ENST00000542557 TRGC1P0CF51 173 aa5.36□□□□□ -1.55
PTPRO-208ENST00000542557 DEFA4P12838 97 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms