RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	SSBP1	Q04837	148 aa	Known RBP	11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	RNASE10	Q5GAN6	216 aa	Known RBP	11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	SLC25A42	Q86VD7	318 aa		11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	SLC38A6	Q8IZM9	456 aa		11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	ARRDC1	Q8N5I2	433 aa		11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	RANGRF	Q9HD47	186 aa	Predicted RBP	11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	HRASLS	Q9HDD0	168 aa		11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	AKIP1	Q9NQ31	210 aa		11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	TMEM140	Q9NV12	185 aa		11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	RABL2B	Q9UNT1	228 aa		11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	ZNF257	Q9Y2Q1	563 aa		11.88	□□□□□ -0.51
ECHDC2-223	ENST00000542552	FAM223B	A6NKX1	122 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	PRH1	P02810	166 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	IFNA6	P05013	189 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	LPAR6	P43657	344 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	OR2B8P	P59922	312 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	RHOG	P84095	191 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	PHLDA2	Q53GA4	152 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	FAM223A	Q8IWN6	122 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	NECAP1	Q8NC96	275 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	OR4D10	Q8NGI6	311 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	SMIM4	Q8WVI0	70 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	DIRAS2	Q96HU8	199 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	FYTTD1	Q96QD9	318 aa	Known RBP	11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	SOST	Q9BQB4	213 aa		11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	RBM38	Q9H0Z9	239 aa	Known RBP	11.87	□□□□□ -0.51
ECHDC2-223	ENST00000542552	ANKRD34B	A5PLL1	514 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	MARCH11	A6NNE9	402 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	AREG	P15514	252 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	CTRB1	P17538	263 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	PTBP1	P26599	531 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	PSMB6	P28072	239 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	TAS2R19	P59542	299 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	RND3	P61587	244 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	CTRB2	Q6GPI1	263 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	ACSM6	Q6P461	480 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	TBC1D26	Q86UD7	250 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	ZNF429	Q86V71	674 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	DMBX1	Q8NFW5	382 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	ZNF486	Q96H40	463 aa	Predicted RBP	11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	FANCD2OS	Q96PS1	177 aa		11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	PEF1	Q9UBV8	284 aa	Known RBP	11.86	□□□□□ -0.51
ECHDC2-223	ENST00000542552	KRAS	P01116	189 aa		11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	TRBV12-3	P01733	135 aa		11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	RPA2	P15927	270 aa		11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	ZP3	P21754	424 aa		11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	S100G	P29377	79 aa		11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	TNFSF8	P32971	234 aa		11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	KLF5	Q13887	457 aa	Predicted RBP	11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	STEAP1B	Q6NZ63	245 aa		11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	C19orf35	Q6ZS72	473 aa		11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	TERB2	Q8NHR7	220 aa		11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	MCFD2	Q8NI22	146 aa		11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	SRSF8	Q9BRL6	282 aa	Known RBP	11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.85	□□□□□ -0.51
ECHDC2-223	ENST00000542552	IGLC7	A0M8Q6	106 aa		11.84	□□□□□ -0.51
ECHDC2-223	ENST00000542552	GSTZ1	O43708	216 aa	Predicted RBP	11.84	□□□□□ -0.51
ECHDC2-223	ENST00000542552	RAB3D	O95716	219 aa		11.84	□□□□□ -0.51
ECHDC2-223	ENST00000542552	IGKV1-39	P01597	117 aa		11.84	□□□□□ -0.51
ECHDC2-223	ENST00000542552	IGKV1D-39	P04432	117 aa		11.84	□□□□□ -0.51
ECHDC2-223	ENST00000542552	ERVK-16	P61578	105 aa		11.84	□□□□□ -0.51
ECHDC2-223	ENST00000542552	ATP5G2	Q06055	141 aa		11.84	□□□□□ -0.51
ECHDC2-223	ENST00000542552	IL18	Q14116	193 aa		11.84	□□□□□ -0.51
ECHDC2-223	ENST00000542552	MRGPRF	Q96AM1	343 aa		11.84	□□□□□ -0.51
ECHDC2-223	ENST00000542552	COMMD5	Q9GZQ3	224 aa		11.84	□□□□□ -0.51
ECHDC2-223	ENST00000542552	SORL1	Q92673	2214 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	TEX50	A0A1B0GTY4	177 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	DPPA5	A6NC42	116 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR2J3	O76001	311 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	G6PC	P35575	357 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	ECI1	P42126	302 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	EXOSC2	Q13868	293 aa	Known RBP	11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	MEF2D	Q14814	521 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	C15orf32	Q32M92	178 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	SEC22A	Q96IW7	307 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	QTRT1	Q9BXR0	403 aa	Known RBP	11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	NDUFA4L2	Q9NRX3	87 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	RSL24D1	Q9UHA3	163 aa	Known RBP	11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	DMRT1	Q9Y5R6	373 aa		11.83	□□□□□ -0.52
ECHDC2-223	ENST00000542552	IGLV11-55	A0A075B6I3	123 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	ZNF701	M0R085	212 aa	Predicted RBP	11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	BMPR1B	O00238	502 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	SAP30	O75446	220 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	DHFR	P00374	187 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	REG1A	P05451	166 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	PGAM2	P15259	253 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	HIST1H1B	P16401	226 aa	Known RBP	11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	PI3	P19957	117 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	PIGP	P57054	158 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	THOC7	Q6I9Y2	204 aa	Known RBP	11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	IL34	Q6ZMJ4	242 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR10W1	Q8NGF6	305 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	TMEM14B	Q9NUH8	114 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	FBXL7	Q9UJT9	491 aa		11.82	□□□□□ -0.52
ECHDC2-223	ENST00000542552	ANKRD20A5P	A0PJZ0	165 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	FABP12	A6NFH5	140 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	NDUFB8	O95169	186 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	TRAPPC2	P0DI81	140 aa		11.81	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms