RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 ZNF45Q02386 682 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 IL18Q14116 193 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 MEF2DQ14814 521 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 KLK9Q2XQG4 91 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 STEAP1BQ6NZ63 245 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 FAM223AQ8IWN6 122 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 OR4D10Q8NGI6 311 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 SRSF8Q9BRL6 282 aaKnown RBP10.11□□□□□ -0.79
LTBR-208ENST00000541005 HRASLSQ9HDD0 168 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 RSL24D1Q9UHA3 163 aaKnown RBP10.11□□□□□ -0.79
LTBR-208ENST00000541005 KLK9Q9UKQ9 250 aa10.11□□□□□ -0.79
LTBR-208ENST00000541005 CGB1A6NKQ9 187 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 RBMXL2O75526 392 aaKnown RBP10.1□□□□□ -0.79
LTBR-208ENST00000541005 RAB3DO95716 219 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 PRB2P02812 416 aaPredicted RBP10.1□□□□□ -0.79
LTBR-208ENST00000541005 CRYGCP07315 174 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 TNFSF8P32971 234 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 OR2B8PP59922 312 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 ERVK-16P61578 105 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 C9orf66Q5T8R8 295 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 THOC7Q6I9Y2 204 aaKnown RBP10.1□□□□□ -0.79
LTBR-208ENST00000541005 ZNF343Q6P1L6 599 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 TBC1D26Q86UD7 250 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 DMBX1Q8NFW5 382 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 TERB2Q8NHR7 220 aa10.1□□□□□ -0.79
LTBR-208ENST00000541005 TRAV3A0A0B4J244 114 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 CCDC160A6NGH7 325 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 HMX3A6NHT5 357 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 SEC14L6B5MCN3 397 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 ZP3P21754 424 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 HOXD3P31249 432 aaPredicted RBP10.09□□□□□ -0.79
LTBR-208ENST00000541005 LPAR6P43657 344 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 INSL3P51460 131 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 SLURP1P55000 103 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 RHOGP84095 191 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 NECAP1Q8NC96 275 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 DCUN1D4Q92564 292 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 MRGPRFQ96AM1 343 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 FYTTD1Q96QD9 318 aaKnown RBP10.09□□□□□ -0.79
LTBR-208ENST00000541005 RANGRFQ9HD47 186 aaPredicted RBP10.09□□□□□ -0.79
LTBR-208ENST00000541005 AKIP1Q9NQ31 210 aa10.09□□□□□ -0.79
LTBR-208ENST00000541005 ZMAT5Q9UDW3 170 aaKnown RBP10.09□□□□□ -0.79
LTBR-208ENST00000541005 IGLC7A0M8Q6 106 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 ANKRD20A5PA0PJZ0 165 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 H0Y980 276 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 OVOL1O14753 267 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 AKAIN1P0CW23 69 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 MYOD1P15172 320 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 PGAM2P15259 253 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 AREGP15514 252 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 CTRB1P17538 263 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 PSMB6P28072 239 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 ECI1P42126 302 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 PIGPP57054 158 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 DEFA5Q01523 94 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 FAM209BQ5JX69 171 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 CTRB2Q6GPI1 263 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 OR4C16Q8NGL9 310 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 OR13C8Q8NGS7 320 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 DLX4Q92988 240 aaPredicted RBP10.08□□□□□ -0.8
LTBR-208ENST00000541005 QTRT1Q9BXR0 403 aaKnown RBP10.08□□□□□ -0.8
LTBR-208ENST00000541005 COMMD5Q9GZQ3 224 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 SLC2A8Q9NY64 477 aa10.08□□□□□ -0.8
LTBR-208ENST00000541005 FABP12A6NFH5 140 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 DHFRP00374 187 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 KRASP01116 189 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 PRH1P02810 166 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 CTSDP07339 412 aaPredicted RBP10.07□□□□□ -0.8
LTBR-208ENST00000541005 RPA2P15927 270 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 G6PCP35575 357 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 PPP5CP53041 499 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 SURF2Q15527 256 aaPredicted RBP10.07□□□□□ -0.8
LTBR-208ENST00000541005 ACSM6Q6P461 480 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 HSD17B13Q7Z5P4 300 aaPredicted RBP10.07□□□□□ -0.8
LTBR-208ENST00000541005 CCDC71LQ8N9Z2 235 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 ZFAND1Q8TCF1 268 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 SEC22AQ96IW7 307 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 FANCD2OSQ96PS1 177 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 PEF1Q9UBV8 284 aaKnown RBP10.07□□□□□ -0.8
LTBR-208ENST00000541005 V9GYH0 126 aa10.07□□□□□ -0.8
LTBR-208ENST00000541005 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.06□□□□□ -0.8
LTBR-208ENST00000541005 DPPA5A6NC42 116 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 C15orf61A6NNL5 157 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 DISC1C4P0D8 188 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 K7EIL1 84 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 B3GALNT1O75752 331 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 IGKV1-39P01597 117 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 IGKV1D-39P04432 117 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 HIST1H1BP16401 226 aaKnown RBP10.06□□□□□ -0.8
LTBR-208ENST00000541005 PI3P19957 117 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 ATP5G2Q06055 141 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 EXOSC2Q13868 293 aaKnown RBP10.06□□□□□ -0.8
LTBR-208ENST00000541005 C15orf32Q32M92 178 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 SCGB2B2Q4G0G5 96 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 FAAP20Q6NZ36 180 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 CCDC190Q86UF4 302 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 ZNF429Q86V71 674 aa10.06□□□□□ -0.8
LTBR-208ENST00000541005 OR1L8Q8NGR8 309 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms