RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NAPSAO96009 420 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 IGHV3-23P01764 117 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 CLEC3BP05452 202 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 RRASP10301 218 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 MGMTP16455 207 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 ZBTB25P24278 435 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 GBX2P52951 348 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-214ENST00000540865 SNRPGP62308 76 aaKnown RBP3.3□□□□□ -1.88
SNHG1-214ENST00000540865 RTL8BQ17RB0 113 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 VMA21Q3ZAQ7 101 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 TMEM41BQ5BJD5 291 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 LIPKQ5VXJ0 399 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 TMEM88Q6PEY1 159 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 GLIPR1L1Q6UWM5 242 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 MOB1BQ7L9L4 216 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 ZNF367Q7RTV3 350 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 UBE2DNLQ8IWF7 75 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 AQP12AQ8IXF9 295 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 CDH26Q8IXH8 852 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 ACOT12Q8WYK0 555 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 RPL36ALQ969Q0 106 aaKnown RBP3.3□□□□□ -1.88
SNHG1-214ENST00000540865 FAM210BQ96KR6 192 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 CXorf58Q96LI9 332 aa3.3□□□□□ -1.88
SNHG1-214ENST00000540865 ZNF184Q99676 751 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-214ENST00000540865 ZNF436Q9C0F3 470 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-214ENST00000540865 TRBV6-6A0A0A6YYG2 114 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 DPPA5A6NC42 116 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 ZNF705EA8MWA4 302 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 TEX22C9J3V5 150 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 FKBP6O75344 327 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 CRTAPO75718 401 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 DHFRP00374 187 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 CRYGCP07315 174 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 CTSDP07339 412 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 HIST1H1BP16401 226 aaKnown RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 IGFBP3P17936 291 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 NPY1RP25929 384 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 PCP4P48539 62 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 TPBGQ13641 420 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 IRF3Q14653 427 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 C12orf74Q32Q52 190 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 C10orf25Q5T742 122 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 KDM4DQ6B0I6 523 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 CEACAM19Q7Z692 300 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 LHFPL3Q86UP9 236 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 MMD2Q8IY49 270 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 TRUB1Q8WWH5 349 aaKnown RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 TMEM190Q8WZ59 177 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 CYYR1Q96J86 154 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 C18orf15Q96N68 181 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 NEDD4LQ96PU5 975 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 FAAP24Q9BTP7 215 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 THTPAQ9BU02 230 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 RIMS4Q9H426 269 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 BANF2Q9H503 90 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 ZNF430Q9H8G1 570 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 CHMP1AQ9HD42 196 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 DAZ1Q9NQZ3 744 aaKnown RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 SLC2A9Q9NRM0 540 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 IMPAD1Q9NX62 359 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 OR1A1Q9P1Q5 309 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 CKLFQ9UBR5 152 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 GHRLQ9UBU3 117 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 MGAT4AQ9UM21 535 aa3.29□□□□□ -1.88
SNHG1-214ENST00000540865 EXOGQ9Y2C4 368 aaKnown RBP3.29□□□□□ -1.88
SNHG1-214ENST00000540865 LRP1Q07954 4544 aaKnown RBP3.28□□□□□ -1.88
SNHG1-214ENST00000540865 SNTNA6NMZ2 147 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 KRTAP29-1A8MX34 341 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-214ENST00000540865 K7EMT4 169 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 PTBP1P26599 531 aaKnown RBP eCLIP3.28□□□□□ -1.883e-55■■□□□ 13.5
SNHG1-214ENST00000540865 HLA-DRB3P79483 266 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 CDK10Q15131 360 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 CCDC58Q4VC31 144 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 C10orf55Q5SWW7 151 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 MEDAGQ5VYS4 303 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 AWAT2Q6E213 333 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 MORN3Q6PF18 240 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-214ENST00000540865 PLET1Q6UQ28 207 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 IDO2Q6ZQW0 420 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 C19orf35Q6ZS72 473 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 C6orf201Q7Z4U5 140 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 SPATA12Q7Z6I5 190 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 C6orf223Q8N319 242 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 JAGN1Q8N5M9 183 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 NRACQ8N912 160 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 SETD6Q8TBK2 473 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 ZNF502Q8TBZ5 544 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 CCDC124Q96CT7 223 aaKnown RBP3.28□□□□□ -1.88
SNHG1-214ENST00000540865 LGALS12Q96DT0 336 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 ADTRPQ96IZ2 230 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 CHRDL1Q9BU40 450 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 GABARAPL3Q9BY60 117 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 GABARAPL1Q9H0R8 117 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 RNF167Q9H6Y7 350 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 SDHAF2Q9NX18 166 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 SMPD3Q9NY59 655 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-214ENST00000540865 RDH8Q9NYR8 311 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 MSRB1Q9NZV6 116 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 CELA1Q9UNI1 258 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 ETV7Q9Y603 341 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms