RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 COMMD5Q9GZQ3 224 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 FKBP11Q9NYL4 201 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 FLVCR2Q9UPI3 526 aa12.15□□□□□ -0.46
DDB1-218ENST00000540784 FOXA2Q9Y261 457 aaPredicted RBP12.15□□□□□ -0.46
DDB1-218ENST00000540784 STAB1Q9NY15 2570 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 FAM240BA0A1B0GVZ2 78 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 A0A1W2PN81 502 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 FGF2P09038 288 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 OR9G9P0C7N8 305 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 VAMP1P23763 118 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 CHRNA7P36544 502 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 AKR1C2P52895 323 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 SUPT4H1P63272 117 aaKnown RBP12.14□□□□□ -0.47
DDB1-218ENST00000540784 IFITM3Q01628 133 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 TMEM187Q14656 261 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 C19orf54Q5BKX5 351 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 CXorf66Q5JRM2 361 aaPredicted RBP12.14□□□□□ -0.47
DDB1-218ENST00000540784 C10orf55Q5SWW7 151 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 OR5M8Q8NGP6 311 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 RNASE11Q8TAA1 199 aaKnown RBP12.14□□□□□ -0.47
DDB1-218ENST00000540784 TMEM56Q96MV1 263 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 ZFP57Q9NU63 452 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 TBC1D24Q9ULP9 559 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 NSG2Q9Y328 171 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 TSSC4Q9Y5U2 329 aaPredicted RBP12.14□□□□□ -0.47
DDB1-218ENST00000540784 TMEM56-RWDD3S4R434 201 aa12.14□□□□□ -0.47
DDB1-218ENST00000540784 TEX50A0A1B0GTY4 177 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 IGKV1-5P01602 117 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 IGLV1-40P01703 118 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 TCRBP04435 133 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 APELAP0DMC3 54 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 PF4V1P10720 104 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 MYOD1P15172 320 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 SLC6A1P30531 599 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 UBE2MP61081 183 aaKnown RBP12.13□□□□□ -0.47
DDB1-218ENST00000540784 NSUN5P1Q3KNT7 163 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 TMEM268Q5VZI3 342 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 NDUFA11Q86Y39 141 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 LGI3Q8N145 548 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 RBPMSQ93062 196 aaKnown RBP12.13□□□□□ -0.47
DDB1-218ENST00000540784 ZNF355PQ9NSJ1 428 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 OR51B2Q9Y5P1 312 aa12.13□□□□□ -0.47
DDB1-218ENST00000540784 PIGBOS1A0A0B4J2F0 54 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 HMX3A6NHT5 357 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 E7EUB6 86 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 RBMXL2O75526 392 aaKnown RBP12.12□□□□□ -0.47
DDB1-218ENST00000540784 SFT2D2O95562 160 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 TRAPPC2P0DI81 140 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 TRAPPC2BP0DI82 140 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 PSMB8P28062 276 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 RAB9AP51151 201 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 RAB25P57735 213 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 DEFA1P59665 94 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 DEFA3P59666 94 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 OR2B8PP59922 312 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 SRPXP78539 464 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 PPP1R1AQ13522 171 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 KHDC1LQ5JSQ8 128 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 OR1L8Q8NGR8 309 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 LHFPL5Q8TAF8 219 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 IL22RA2Q969J5 263 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 KLK15Q9H2R5 256 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 PRR13Q9NZ81 148 aa12.12□□□□□ -0.47
DDB1-218ENST00000540784 A0A1W2PRX2 142 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 M0QZ24 198 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 SOX15O60248 233 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
DDB1-218ENST00000540784 ANXA7P20073 488 aaKnown RBP12.11□□□□□ -0.47
DDB1-218ENST00000540784 IZUMO4Q1ZYL8 232 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 LCNL1Q6ZST4 164 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 FAM219AQ8IW50 185 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 TTC9CQ8N5M4 171 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 CASTOR1Q8WTX7 329 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 LSM10Q969L4 123 aaKnown RBP12.11□□□□□ -0.47
DDB1-218ENST00000540784 MS4A10Q96PG2 267 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
DDB1-218ENST00000540784 C20orf85Q9H1P6 137 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 PLXNB1O43157 2135 aa12.11□□□□□ -0.47
DDB1-218ENST00000540784 TRAV6A0A075B6T7 132 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 A0A0B4J293 547 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 C9orf170A2RU37 121 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 C15orf61A6NNL5 157 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 TEX22C9J3V5 150 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 H2AFB2P0C5Z0 115 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 OR4E1P0C645 316 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 P0C879 139 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 C4orf46Q504U0 113 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 SLC35G3Q8N808 338 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 OR5B3Q8NH48 314 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 FAM110DQ8TAY7 271 aaPredicted RBP12.1□□□□□ -0.47
DDB1-218ENST00000540784 ENKURQ8TC29 256 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 GPR146Q96CH1 333 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 SRSF8Q9BRL6 282 aaKnown RBP12.1□□□□□ -0.47
DDB1-218ENST00000540784 ALX4Q9H161 411 aaPredicted RBP12.1□□□□□ -0.47
DDB1-218ENST00000540784 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms