RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 APELAP0DMC3 54 aa10.36□□□□□ -0.75
CCDC130-202ENST00000540216 PTBP1P26599 531 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC130-202ENST00000540216 S100A5P33763 92 aa10.36□□□□□ -0.75
CCDC130-202ENST00000540216 LPAR6P43657 344 aa10.36□□□□□ -0.75
CCDC130-202ENST00000540216 EGFEM1PQ0D2K5 195 aa10.36□□□□□ -0.75
CCDC130-202ENST00000540216 TBC1D26Q86UD7 250 aa10.36□□□□□ -0.75
CCDC130-202ENST00000540216 FAM223AQ8IWN6 122 aa10.36□□□□□ -0.75
CCDC130-202ENST00000540216 ZFAND1Q8TCF1 268 aa10.36□□□□□ -0.75
CCDC130-202ENST00000540216 SRSF8Q9BRL6 282 aaKnown RBP10.36□□□□□ -0.75
CCDC130-202ENST00000540216 COMMD5Q9GZQ3 224 aa10.36□□□□□ -0.75
CCDC130-202ENST00000540216 DPPA5A6NC42 116 aa10.35□□□□□ -0.75
CCDC130-202ENST00000540216 DISC1C4P0D8 188 aa10.35□□□□□ -0.75
CCDC130-202ENST00000540216 DHFRP00374 187 aa10.35□□□□□ -0.75
CCDC130-202ENST00000540216 IGHV3-11P01762 117 aa10.35□□□□□ -0.75
CCDC130-202ENST00000540216 OR2B8PP59922 312 aa10.35□□□□□ -0.75
CCDC130-202ENST00000540216 SURF2Q15527 256 aaPredicted RBP10.35□□□□□ -0.75
CCDC130-202ENST00000540216 ZNF585BQ52M93 769 aa10.35□□□□□ -0.75
CCDC130-202ENST00000540216 FAM209BQ5JX69 171 aa10.35□□□□□ -0.75
CCDC130-202ENST00000540216 C9orf66Q5T8R8 295 aa10.35□□□□□ -0.75
CCDC130-202ENST00000540216 THOC7Q6I9Y2 204 aaKnown RBP10.35□□□□□ -0.75
CCDC130-202ENST00000540216 CCDC71LQ8N9Z2 235 aa10.35□□□□□ -0.75
CCDC130-202ENST00000540216 FYTTD1Q96QD9 318 aaKnown RBP10.35□□□□□ -0.75
CCDC130-202ENST00000540216 PRRT1Q99946 306 aa10.35□□□□□ -0.75
CCDC130-202ENST00000540216 ALX4Q9H161 411 aaPredicted RBP10.35□□□□□ -0.75
CCDC130-202ENST00000540216 IGHV4OR15-8A0A075B7B6 117 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 A0A087WW49 117 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 TRBV9A0A0B4J1U6 114 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 A0A1B0GW64 132 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 ANKRD20A5PA0PJZ0 165 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 H0Y980 276 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 B3GALNT1O75752 331 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 KRASP01116 189 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 SERPINE2P07093 398 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 CRYGCP07315 174 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 RPA2P15927 270 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 ZP3P21754 424 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 INSL3P51460 131 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 PPP5CP53041 499 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 PIGPP57054 158 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 RHOGP84095 191 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 SCGB2B2Q4G0G5 96 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 HSD17B13Q7Z5P4 300 aaPredicted RBP10.34□□□□□ -0.75
CCDC130-202ENST00000540216 NECAP1Q8NC96 275 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 OR4C16Q8NGL9 310 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 OR13C8Q8NGS7 320 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 TSC22D3Q99576 134 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 RANGRFQ9HD47 186 aaPredicted RBP10.34□□□□□ -0.75
CCDC130-202ENST00000540216 NDUFA13Q9P0J0 144 aa10.34□□□□□ -0.75
CCDC130-202ENST00000540216 TRAV3A0A0B4J244 114 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 HMX3A6NHT5 357 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 SEC14L6B5MCN3 397 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 E7EUB6 86 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 OVOL1O14753 267 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 SNAPC5O75971 98 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 CTSDP07339 412 aaPredicted RBP10.33□□□□□ -0.76
CCDC130-202ENST00000540216 HIST1H1BP16401 226 aaKnown RBP10.33□□□□□ -0.76
CCDC130-202ENST00000540216 PSMB6P28072 239 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 G6PCP35575 357 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 ZNF343Q6P1L6 599 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 DCUN1D4Q92564 292 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 QTRT1Q9BXR0 403 aaKnown RBP10.33□□□□□ -0.76
CCDC130-202ENST00000540216 AKIP1Q9NQ31 210 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 SLC2A8Q9NY64 477 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 FKBP11Q9NYL4 201 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 COPZ2Q9P299 210 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 PRNDQ9UKY0 176 aa10.33□□□□□ -0.76
CCDC130-202ENST00000540216 C14orf166Q9Y224 244 aaKnown RBP10.33□□□□□ -0.76
CCDC130-202ENST00000540216 ATG12O94817 140 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 AREGP15514 252 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 CTRB1P17538 263 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 PI3P19957 117 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 HOXD3P31249 432 aaPredicted RBP10.32□□□□□ -0.76
CCDC130-202ENST00000540216 SLURP1P55000 103 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 AP3S2P59780 193 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 ZNF45Q02386 682 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 ATP5G2Q06055 141 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 KLK9Q2XQG4 91 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 CTRB2Q6GPI1 263 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 FAAP20Q6NZ36 180 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 CCDC190Q86UF4 302 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 OR1L8Q8NGR8 309 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 OR5B3Q8NH48 314 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 MARCH1Q8TCQ1 289 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 DEDD2Q8WXF8 326 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 DLX4Q92988 240 aaPredicted RBP10.32□□□□□ -0.76
CCDC130-202ENST00000540216 SEC22AQ96IW7 307 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 THAP7Q9BT49 309 aaPredicted RBP10.32□□□□□ -0.76
CCDC130-202ENST00000540216 AURKAIP1Q9NWT8 199 aaPredicted RBP10.32□□□□□ -0.76
CCDC130-202ENST00000540216 PEF1Q9UBV8 284 aaKnown RBP10.32□□□□□ -0.76
CCDC130-202ENST00000540216 SCP2D1Q9UJQ7 156 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 KLK9Q9UKQ9 250 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 V9GYH0 126 aa10.32□□□□□ -0.76
CCDC130-202ENST00000540216 C3orf85A0A1B0GTC6 90 aa10.31□□□□□ -0.76
CCDC130-202ENST00000540216 IGLC7A0M8Q6 106 aa10.31□□□□□ -0.76
CCDC130-202ENST00000540216 CGB1A6NKQ9 187 aa10.31□□□□□ -0.76
CCDC130-202ENST00000540216 CYB5BO43169 146 aa10.31□□□□□ -0.76
CCDC130-202ENST00000540216 PRH1P02810 166 aa10.31□□□□□ -0.76
CCDC130-202ENST00000540216 TRAPPC2P0DI81 140 aa10.31□□□□□ -0.76
CCDC130-202ENST00000540216 TRAPPC2BP0DI82 140 aa10.31□□□□□ -0.76
CCDC130-202ENST00000540216 MYOD1P15172 320 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms