RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 TCF21O43680 179 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 PROP1O75360 226 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 PMCHP20382 165 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 MMDQ15546 238 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 KRTCAP3Q53RY4 240 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 SFRP2Q96HF1 295 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 BTF3L4Q96K17 158 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 TUBG2Q9NRH3 451 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 KCNIP1Q9NZI2 227 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 PXMP4Q9Y6I8 212 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 KALRNO60229 2985 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 OOEPA6NGQ2 149 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 MYOD1P15172 320 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 OR10J1P30954 320 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 PDLIM4P50479 330 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 LBHQ53QV2 105 aaPredicted RBP10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 ZCCHC14Q8WYQ9 949 aaKnown RBP10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 LEAP2Q969E1 77 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 AGMATQ9BSE5 352 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 WNT10AQ9GZT5 417 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 OPN3Q9H1Y3 402 aaPredicted RBP10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 ELOVL5Q9NYP7 299 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 INTS1Q8N201 2190 aaKnown RBP10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 CSMD1Q96PZ7 3565 aa10.41□□□□□ -0.74
SFSWAP-208ENST00000539506 TRAV3A0A0B4J244 114 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 FCN1O00602 326 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 RAB4AP20338 218 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 CCKARP32238 428 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 LINC00310P59036 64 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 UTF1Q5T230 341 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 FAM19A2Q8N3H0 131 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 CXXC4Q9H2H0 198 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 ASCL3Q9NQ33 180 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 AKAP13Q12802 2813 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 GVINP1Q7Z2Y8 2422 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 IGHV1-18A0A0C4DH31 117 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 TIMM8AO60220 97 aaPredicted RBP10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 TNFSF13O75888 250 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 CRISP2P16562 243 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 AARDQ4LEZ3 155 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 SEM1Q6ZVN7 128 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 TAAR6Q96RI8 345 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 MRPL18Q9H0U6 180 aaKnown RBP10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 TMEM106BQ9NUM4 274 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 OTOGLQ3ZCN5 2332 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 PTPRBP23467 1997 aa10.4□□□□□ -0.74
SFSWAP-208ENST00000539506 POLEQ07864 2286 aa10.4□□□□□ -0.75
SFSWAP-208ENST00000539506 RPLP1P05386 114 aaKnown RBP10.4□□□□□ -0.75
SFSWAP-208ENST00000539506 OR9G9P0C7N8 305 aa10.4□□□□□ -0.75
SFSWAP-208ENST00000539506 DNLZQ5SXM8 178 aa10.4□□□□□ -0.75
SFSWAP-208ENST00000539506 IGFL2Q6UWQ7 119 aa10.4□□□□□ -0.75
SFSWAP-208ENST00000539506 PIP4P1Q86T03 277 aa10.4□□□□□ -0.75
SFSWAP-208ENST00000539506 NHLRC2Q8NBF2 726 aa10.4□□□□□ -0.75
SFSWAP-208ENST00000539506 DEFB124Q8NES8 71 aa10.4□□□□□ -0.75
SFSWAP-208ENST00000539506 IGHV2OR16-5A0A0B4J2B6 119 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 C15orf65H3BRN8 121 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 DLEU1O43261 78 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 FCGR3BO75015 233 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 IGLV1-44P01699 117 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 TIMP3P35625 211 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 SRP14P37108 136 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 PRR7Q8TB68 274 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 TP73-AS1Q9UF72 201 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 YTHDF2Q9Y5A9 579 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 ADGRG4Q8IZF6 3080 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 PIGBOS1A0A0B4J2F0 54 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 SNURFLB1AK76 121 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 FAM90A26D6RGX4 464 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 CA1P00915 261 aaPredicted RBP10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 GATA2P23769 480 aaPredicted RBP10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 CD1BP29016 333 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 DOLPP1Q86YN1 238 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 OR8I2Q8N0Y5 310 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 STARD4Q96DR4 205 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 LPAR2Q9HBW0 351 aa10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 SEPSECSQ9HD40 501 aaKnown RBP10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 HEYLQ9NQ87 328 aaPredicted RBP10.39□□□□□ -0.75
SFSWAP-208ENST00000539506 MARCH11A6NNE9 402 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 RNF212BA8MTL3 300 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 K7EN84 100 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 CGAP01215 116 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 PRB4P10163 310 aaPredicted RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 NTF3P20783 257 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 ACSF3Q4G176 576 aaPredicted RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 CENPVQ7Z7K6 275 aaPredicted RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 OR10G8Q8NGN5 311 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 OR1L6Q8NGR2 347 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 NINJ1Q92982 152 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 VAMP8Q9BV40 100 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 PARD6GQ9BYG4 376 aaPredicted RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 ZNF71Q9NQZ8 489 aaPredicted RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 PLSCR4Q9NRQ2 329 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 PDLIM3Q53GG5 364 aaPredicted RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 ZBTB34Q8NCN2 500 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 RNASE7Q9H1E1 156 aaKnown RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 CNOT1A5YKK6 2376 aaKnown RBP10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 IGKV1D-17A0A075B6S4 117 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 C15orf62A8K5M9 175 aa10.38□□□□□ -0.75
SFSWAP-208ENST00000539506 FTH1P19P0C7X4 201 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms